Pairwise Alignments

Query, 441 a.a., MexE family multidrug efflux RND transporter periplasmic adaptor subunit from Ralstonia solanacearum UW163

Subject, 422 a.a., Probable Co/Zn/Cd efflux system membrane fusion protein from Acidovorax sp. GW101-3H11

 Score =  394 bits (1011), Expect = e-114
 Identities = 219/419 (52%), Positives = 278/419 (66%), Gaps = 24/419 (5%)

Query: 6   RTLALSVAAVIGAAAVGTYGVVSNAGASQQ--PAAAPAAMPVDVAPAIARNVTEWDEFSG 63
           R L L+  A    AAV    +V  + A+Q     A P AMPV VA  + +++  WDEFSG
Sbjct: 15  RPLGLATIATAVTAAVAALILVFQSPAAQANGEGATPPAMPVSVAAVVQKDIALWDEFSG 74

Query: 64  RLEAVERVEVRPLVGGTIVAVHFKDGSIVKKGDPLFTIDPRPYAAEVARTQAALTAAKSR 123
           RLEAV+RV+VRP V G + AVHF++GS+VK+GD L T+DP PYAAEV R +A + AA++R
Sbjct: 75  RLEAVQRVDVRPRVSGAVQAVHFREGSLVKQGDLLVTVDPAPYAAEVDRAEAQVVAAQAR 134

Query: 124 VAYTASELDRAQKLVADNAIARREFEEKENAAREAQANLQGAAAALDAARLNLEYTRIVA 183
           V+YT SEL+RA +L+ + AIA+RE +E+ NA REA ANL+ A AAL  A+LNL YT++ A
Sbjct: 135 VSYTRSELERATRLLEEKAIAQREHDERLNAQREADANLRAAQAALQTAKLNLSYTQVRA 194

Query: 184 PVAGRVSRAEITVGNVVATGGAAPVLTTLVSVSPMYAAFDADEQTYLRFSANAAHGG--- 240
           PVAGRV R E+TVGN+VA G  APVLTTLVSVSP+YA+FD DEQ  ++  A+   G    
Sbjct: 195 PVAGRVGRIEVTVGNLVAAGAGAPVLTTLVSVSPIYASFDTDEQIVVKALADLQSGSKGQ 254

Query: 241 -------RTPVYIGLANEDGYTREGVIQSVDNRLDVRSGTIRVRATVDNADGRLTPGLYA 293
                  R PV +G     G    G +Q +DN++D +SGT+RVRA  DN DG L PG +A
Sbjct: 255 SARQLIERIPVQMGTGTTGGTPYAGRLQLIDNQVDAKSGTVRVRAVFDNEDGALIPGQFA 314

Query: 294 RVKMSSGTPHDAVLISDKAVGTDQDKKFVLVVDAANKTSYRAVTLGASVDGLRVVKAGLK 353
           RV+M       A+LI+++AVGTDQ+KKFV+VV   NK  YR VTLGA +DGLRVV +GLK
Sbjct: 315 RVRMGQARNTQALLINERAVGTDQNKKFVMVVGEGNKAEYREVTLGAPIDGLRVVTSGLK 374

Query: 354 VGERIVVNGLQRVRPGDPVTPNAVTMDSLVAKRTVHPGSPPQPDADARNTAEAAAPAPA 412
            GE IVVNGLQRVRPG  V P  V M    AK  +         A  R  A+ AA +PA
Sbjct: 375 AGENIVVNGLQRVRPGAVVAPQPVPM---TAKAEI---------AGDRKEAKNAAKSPA 421