Pairwise Alignments

Query, 307 a.a., LysR family transcriptional regulator from Ralstonia solanacearum UW163

Subject, 303 a.a., glycine cleavage system transcriptional activator, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  148 bits (373), Expect = 2e-40
 Identities = 104/295 (35%), Positives = 147/295 (49%), Gaps = 8/295 (2%)

Query: 6   LPPLQYLIAFEAVVRHCSFTRAATELNLTQSAVSRQIGQLEAFLGRPLFAREPRRALQLT 65
           LPPL  + AFEA  RH SFTRAA EL +TQ+AVS QI  LE FLG  LF R+  R+L LT
Sbjct: 5   LPPLNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEDFLGLKLFRRK-NRSLLLT 63

Query: 66  VAGKRYADRVRVLLEMCSDATYDVMKRYGDLDLAVACSSGVATLWLAPRIGSFHASHPNI 125
             G+ Y   ++ +    +DAT  ++ R     L V+ S   A  WL PR+  F   +P I
Sbjct: 64  EEGQSYFLDIKDIFIQLADATDRLLARSAIGSLTVSMSPSFAIQWLVPRLSKFSEKNPEI 123

Query: 126 NLRIIVRDAFTSLTPSEFDVGLYYLRESCGPQFNAQPLIDEEVFPVCSPSYLDG--RLVT 183
           ++RI   D   S    + DV +YY   +  P   A  L +E + PVCSP  L+G   L  
Sbjct: 124 DVRIKAVDTEASSLTDDVDVAIYYGLGN-WPGLRADKLRNEVLIPVCSPMLLNGPKPLSK 182

Query: 184 PEELTRQTLLMQDDRQMTWMSWEEWLSLNGVPMPKKPRAIISNLYPQLVQMALHGQGVLL 243
           PE+L   TLL  D  +  W +W     +  + + + P    S+L   ++Q A HGQGV L
Sbjct: 183 PEDLKHHTLL-HDMSRHDWQAWFRQCGITDINVNQGPIFSHSSL---VLQAAAHGQGVAL 238

Query: 244 GWRQIIDCHLETKSLVRATRETATFGGGYHVITPSDRAMNRATTLFASWLLQQRA 298
           G+  +    ++   LV   +E       Y+++   + A       F  W+L   A
Sbjct: 239 GYSVLARPDIKAGRLVCPFQEVLVSKDAYYLVCQQNHAELGKVVAFREWMLDMFA 293