Pairwise Alignments

Query, 442 a.a., two-component sensor histidine kinase from Ralstonia solanacearum UW163

Subject, 429 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  129 bits (324), Expect = 2e-34
 Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 43/289 (14%)

Query: 187 LKEELAEKNEQLEAINHSLTEIKGQLLQQEKMVAIGTLSAGLLHEINNPVNFC------- 239
           L E+L +++  L  +N  L   + QLLQ EKMVAIG L+AG+ HEINNP+ F        
Sbjct: 140 LSEQLEQEHTALSLLNKKLEAAQNQLLQSEKMVAIGQLAAGVAHEINNPIGFVNSNLQSL 199

Query: 240 ------LMAIAVAQEDTTAKASPM---------------------LLECLADAKEGMQRV 272
                 L+ +    +  T K   +                     L + + ++ EG+ RV
Sbjct: 200 QDYNNKLLKLLNFYQKLTHKIGSVPYFTLEQDMLKRYQFEFICSDLPDLIRESIEGLDRV 259

Query: 273 QHIVSDLKTFAYRSPEKGETDTPFLVEKAIDSAIRLTSHELRGVEVNRQLPPDTL--VRG 330
             IV  LK+F++    + +      V + I++ +++ +++++   V  +   D L  +  
Sbjct: 260 AVIVKSLKSFSHVDSSEWQYAN---VIEGIENTLKIAANQIKYKAVVLRNFQDNLPELYC 316

Query: 331 DEAAIIGVLINLLSNAALAMHKAQRENPRIDVSAEWQNGRLFVVVTDNGPGIAEKNLSRV 390
               +  V +NLL NAA A+   +R    IDVSA   +    +V+ D G GIA  +L ++
Sbjct: 317 QPMQLNQVFLNLLVNAAQAIE--ERGEISIDVSAS--DAEFIIVIRDTGSGIAASDLRKI 372

Query: 391 FEPFFTTREVGKGLGLGLSISYSVIQHHGGTLSVASQEGAWARFTFDLP 439
           FEPF+TT+ VG G GLGLS+SYS++Q H G + V+S  G    FT  LP
Sbjct: 373 FEPFYTTKLVGTGTGLGLSLSYSIVQKHKGEIKVSSVLGEGTAFTVILP 421