Pairwise Alignments

Query, 509 a.a., ABC transporter substrate-binding protein from Ralstonia solanacearum UW163

Subject, 520 a.a., oligopeptide/dipeptide ABC transporter, periplasmic oligopeptide/dipeptide-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  263 bits (671), Expect = 1e-74
 Identities = 165/507 (32%), Positives = 252/507 (49%), Gaps = 38/507 (7%)

Query: 1   MAGTGPLALAAD---LKIGMSSPPTSMDPHFYNLFSNINVSEHMFECLVKMDADSHIIPG 57
           M   G +A AA+    +I M+S P S+DPH       +  S  +F+ LV+   D    P 
Sbjct: 15  MLALGGIANAAEGKTFRIAMASDPESLDPHMQLSGPILAYSHWVFDPLVRWTPDMKFEPR 74

Query: 58  LAESWKMVNNLTWEFKLRPGVKFHDGSELTAEDVAWSLDRPATIVNSPGKFDTYTKAIIN 117
           LAE W+ +N  T  F LR GVKFH G+  TA+DVAW+LDR     +  G F  + +    
Sbjct: 75  LAEKWEQINPTTMRFHLRKGVKFHSGNPFTAKDVAWTLDRLKKSPDFKGLFIKFAE---- 130

Query: 118 KKIIDKYTIQLTTSQPYPLILSDLTSVYIVQKKATQGLSSDDFAQGKGMI---------- 167
            K+ID  TI + T++PY L+++  T ++ +  K   G  +D   Q K  I          
Sbjct: 131 PKVIDDNTIDIITTEPYGLVMNLATYIFPMDSKFYTG--TDAKGQPKDAIVKSGYSFAND 188

Query: 168 ---GTGPFKFVSYARDDRVELVRNEQYWGSKPAWDKVTLRFIPNGATRIAALLSGDVQAI 224
              GTGP+      +  ++ L  N+ YWG +   D + L  I N ATR+AA+L GDV  I
Sbjct: 189 NASGTGPYSVAEREQGVKLILKANKGYWGKRGNVDTIELTPIKNEATRVAAILKGDVDFI 248

Query: 225 ENVPTPDLARVRGDASLNVFSKISHRVIYLYTDDKRDQTPFVTSKDGKPLDKNPLKDPRV 284
             VP  D  ++  +A + + +  S R+I +  + K+                    D RV
Sbjct: 249 SPVPVQDYDQLSKNADVELITMPSARIITIQLNQKKFP---------------QFADKRV 293

Query: 285 RRAMSMAINRQGIKDRIMEGLSEPTNNLVPPQLFGYNPNLKTLKYDPEGAKKLLAEAGYP 344
           R A+  A +  GI  ++M+G +  T    P    GY  +LK  +Y+ + AKKL+ +AG+ 
Sbjct: 294 REAIIAATDTAGIVAKVMKGYTTTTQQQAPKGFAGYIADLKP-RYNLDNAKKLMKDAGFE 352

Query: 345 DGFGITLHTPNNRYVNDEKIAQTIAQNLTRIGIVTKVEGMPMATFAAKSIRHEYSFGLVG 404
            GF +++  PNNRYVNDEKIAQ     + RI I   ++ MP A +  +         ++G
Sbjct: 353 KGFEVSMIAPNNRYVNDEKIAQAFVSMMARINIKVNLKTMPKAQYWDQFDAQVADIQMIG 412

Query: 405 WGAQTGEVSSPLRALVACEDSKKGYGTVNWGQYCNPKMDAVLDKALYTMDDKERSKLLQE 464
           W   T + ++    L+   +   G G  N G Y NPK DA++D A    D  +R  LL+E
Sbjct: 413 WHPDTEDTANYSEYLLMTPNKDTGMGQYNSGNYANPKFDALIDAANRETDPAKRDALLKE 472

Query: 465 ATAIVVDDGGIIPIHHQVTTWAARKGI 491
           +  +  +D   +P+H +  +WAARK +
Sbjct: 473 SEQMAYNDAAFVPLHWEPLSWAARKTV 499