Pairwise Alignments

Query, 371 a.a., DNA polymerase III subunit beta from Ralstonia solanacearum UW163

Subject, 366 a.a., DNA polymerase III, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  301 bits (770), Expect = 2e-86
 Identities = 163/366 (44%), Positives = 238/366 (65%), Gaps = 8/366 (2%)

Query: 8   RDNLLRPLQIVSGIVERRHTLPILANLLIRKNGERVSFLSTDIEIQITTHADCGAGNGDI 67
           RD LL+PLQ+V G VERRH LPILANLL+  +G  +    TD+E+++   A       + 
Sbjct: 7   RDALLKPLQLVCGAVERRHNLPILANLLVEVSGHSLKLTGTDLEVELVGQAVIHGDIEEG 66

Query: 68  ATTVAARKLVDILRAMPD-GEVTLTLNDKRMSVQSGKSRFALQTLAAEEFPTVAEANDFG 126
            TTV A+KL+DI++++P+  E+ +   D +  ++SG+SRF+L TL AEE+P V EA    
Sbjct: 67  RTTVPAKKLLDIVKSLPEQSELKVEQQDNKWLLRSGRSRFSLATLPAEEYPNV-EAFQAE 125

Query: 127 ARITLPQKTLKHLLAMVHFAMAQQDIRYYLNGMLLVVDGKQVMAVATDGHRLAYCG-VET 185
              TL Q  LK L+    F+MA QD+RYYLNG+L+  +G  + A+ATDGHRLA    V  
Sbjct: 126 IEFTLKQGVLKSLIDATQFSMANQDVRYYLNGLLIETEGNMLRAIATDGHRLALSHRVIE 185

Query: 186 GEQPAGAGGRHEVIIPRKTILELQRLLEDVDDPVSVQLASNQVKFTFGNIELISKLVEGK 245
            + P       +VI+PRK ++E+ RLLE  D  +++ +  N ++ T       SKLV+G+
Sbjct: 186 AQLP-----EKQVIVPRKGVMEMARLLETDDLDIAISIGDNAIRATTSTTVFTSKLVDGR 240

Query: 246 FPDFQRVIPKGYRNSFTIDRAFLQQALQRTAILTTDKFKGVRCMLDTNVLKISSTNADQE 305
           FPD++RV+PKG        R   +QAL R +IL+ +KF+GVR  L+  +LKI++ N +QE
Sbjct: 241 FPDYRRVLPKGGDKIVIASRNHFKQALTRASILSNEKFRGVRIQLEAGLLKITANNPEQE 300

Query: 306 EAQEELEIDYQGDALDIGFNVTYLLDVLANLKAEKVQVSLGDSNSSALITLPDDDTFKYV 365
           EA+E +++DY    L+IGFNV+YLLDVL NLK++ V+++L D NSSAL+    ++   YV
Sbjct: 301 EAEEIIDVDYNNLPLEIGFNVSYLLDVLNNLKSDDVRITLIDGNSSALLENHLEEDSMYV 360

Query: 366 VMPMRI 371
           VMPMR+
Sbjct: 361 VMPMRL 366