Pairwise Alignments

Query, 200 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Ralstonia solanacearum PSI07

Subject, 184 a.a., N-acetyl-anhydromuranmyl-L-alanine amidase (RefSeq) from Shewanella loihica PV-4

 Score =  171 bits (433), Expect = 7e-48
 Identities = 88/171 (51%), Positives = 105/171 (61%), Gaps = 4/171 (2%)

Query: 14  GWVAGVHRHPSPNIDARPEGMPIDLIVLHNISLPPARFGTDDVLDFFTNTLDCSAHPYFE 73
           GW+    +  SP+ +ARP+   + L+V+HNISLP  +FG   +   F   LD  A   F 
Sbjct: 9   GWIRECRQCVSPHFNARPDD-EVSLLVIHNISLPAGQFGLPYIDQLFQGCLDIQADESFC 67

Query: 74  QLRGVRVSAHFFIRRTGECVQLAPCDARAWHAGVSDFFGRTRCNDFSIGIEIEGTDDQPF 133
            L+G+ VSAHF IRR GE VQ   CD RAWHAGVS F GRT CNDF+IGIE+EGTD   +
Sbjct: 68  DLQGLEVSAHFLIRRDGELVQYVSCDDRAWHAGVSSFAGRTGCNDFAIGIELEGTDSLAY 127

Query: 134 TPAQYAVTAALVRAICAAYPI---RAIAGHSDIAPGRKTDPGPCFDWTHLR 181
           T  QY     L   +  AYP+     I GHSDIAPGRKTDPG  FDW   R
Sbjct: 128 TDEQYERLTQLTLVLFDAYPMLNRNLIVGHSDIAPGRKTDPGESFDWHRYR 178