Pairwise Alignments

Query, 419 a.a., ABC transporter substrate-binding protein from Ralstonia solanacearum PSI07

Subject, 404 a.a., amide-urea binding protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  142 bits (357), Expect = 2e-38
 Identities = 119/415 (28%), Positives = 196/415 (47%), Gaps = 28/415 (6%)

Query: 13  TVLKSALAAVAVQLAPPFIRRARGEAPLRIGMVDPLTGVYAAVA-QNEVTGARLAVAQIN 71
           T  ++ ++A+ + LAP        +  +RIG+++  +GVYA +A    V  AR+A  +  
Sbjct: 4   TPRRALISALLLGLAPYAQAAEISDKVIRIGVLNDQSGVYADIAGTGSVEAARMAAEEFG 63

Query: 72  ARGGILGRPIELLVEDSANDVGTGVQKARKLIERDQVSFLIGDVNSGIAQAIAQVSNEKK 131
             G I G  IE +  D  N        A + I+   V  ++   NS    A+ ++   KK
Sbjct: 64  --GEIDGAKIEFVSADHQNKADIAANVANQWIDTGGVDAIVDIPNSSAMLAVQEIGRTKK 121

Query: 132 VLHIVSGGHTDTITGSDCKWNVYRVCNTTSMEANAVANLLFTKYGKKWHFITPDYAFGHT 191
            + I SGG +   TG  C    +     T   A   A  L    G  W+ I  DYAFGH+
Sbjct: 122 RIVIASGGGSTDFTGPKCSPYGFHWTYDTYSLAKGTAESLVKDGGTTWYNIVVDYAFGHS 181

Query: 192 LQKAAAADLQKLGGTITGNELTPLGTTDFSAYLIKARAANPDVLLVLPQGSDMVNCLKQI 251
           L    +  + + GG + G  L PLGT+DFS+YL++A+ +   V+ VL  G+D VN +KQ 
Sbjct: 182 LDTDTSRFITQAGGQVVGRVLHPLGTSDFSSYLLQAQGSGAKVIGVLSAGADTVNAIKQA 241

Query: 252 AQFGI--GKQMHIAGLQQELESLEAMPPEARVGIWMFE-WYWKQPGVPGVEKFVADIRKV 308
           A+FGI  G Q+ +AGL    +++ ++  E   G+ +   +YW +        + A+  K 
Sbjct: 242 AEFGITQGGQI-LAGLLIFDQTVHSLGLETAQGLRLTTGFYWDR--TDATRAWSAEFLKR 298

Query: 309 NNGKVPTARHWFGFTSV-HTLAAVANQEKTLDSRKLAEALGGFALADDVKLQP-NKCYYR 366
           +   +P+  H   ++ V H LAA+          K A      A+A  ++  P N  +  
Sbjct: 299 STKNIPSMAHAGVYSGVRHYLAAI----------KAAGTDNADAVAAKMRETPVNDMFAE 348

Query: 367 KG----DHQLMTSSFVGEALSKPAGDPE--DLFRVDHVVAGDQTAPPESATGCTI 415
            G    D +++   ++ E + KPA      DL R+ HV+ G++   P +  GC +
Sbjct: 349 NGTVRADGRMVHDMYLME-VKKPADSTSEWDLMRLVHVIPGEEAYRPLAEGGCPL 402