Pairwise Alignments

Query, 476 a.a., MATE family efflux transporter from Ralstonia solanacearum PSI07

Subject, 456 a.a., MATE efflux family protein (RefSeq) from Shewanella loihica PV-4

 Score = 92.8 bits (229), Expect = 2e-23
 Identities = 91/334 (27%), Positives = 146/334 (43%), Gaps = 7/334 (2%)

Query: 14  MTDGPIAGTLFALFLPILFGNLMQALNGSVNAMWVGHTLGEAALAAAANANAVISFVVAV 73
           +   PI   ++   +P +   ++  +  +++ M+VGH LGE  LA    A  V + + AV
Sbjct: 16  LATAPIPKLVWRYAIPTILSMVVTGVYVAIDGMFVGHYLGEVGLAGMMLAYPVGAILYAV 75

Query: 74  VMGIGMAASILIGQSLGAKDIAQAKRVVGTGATFFVGLAVLIALAAAVLTGRIVARMQAP 133
              IGM A+ L+  +LG KD+A+A+ ++G   T  +     +AL     +  I+  + A 
Sbjct: 76  GALIGMGAASLVSINLGLKDVARARHLLGNAFTLCLLAGTGLALLGTRWSQTILIWLGAE 135

Query: 134 PEVLPLAVAYLRVLFLAMPFQAAYIFLTILLRSTGDSKTPFRFQIVCVGLDIALNPLLIV 193
            EVL  A  YL   F    F    I  T LLR+ G         I+   L++ L+ LLIV
Sbjct: 136 GEVLTSAEQYLFWYFALGVFPVLAIAFTALLRNDGRPGFVTLVLILSGCLNVLLDWLLIV 195

Query: 194 GWGPLPALGIAGSATATLMAQGIGLMALAGRLYRTRHILCLRADETHLLRPDPRILKALI 253
            +      G+AG+A AT++ Q    +A     +  R  L +   +  L       +  + 
Sbjct: 196 VF----PYGLAGAAIATMICQAFTALACLQHFFTKRTRLGINWQQMRLNLDHCSNILRVG 251

Query: 254 VKGLPMGLHMAVVSLAMVMMMSLVNRFGAQLSAAYGACLHLWNYIQLPVLAMGMTVTPMA 313
           V    M L++++V     M    V   G    AAYG   +      L    +     P+ 
Sbjct: 252 VPSFLMNLYLSIVLTLHNMAFLWVG--GPIHVAAYGVVSYAEALFYLIFEGIAFGTQPLF 309

Query: 314 AQNLGARRLDRV-GRIALAGIALNVTMAGGMVLV 346
           + N GA+R DRV   + L  I   VT   G+V +
Sbjct: 310 SFNTGAKRFDRVFETLRLVIIMTLVTALAGVVFI 343



 Score = 26.2 bits (56), Expect = 0.002
 Identities = 30/139 (21%), Positives = 55/139 (39%), Gaps = 25/139 (17%)

Query: 27  FLPILFGNLMQALNGSVNAMWVGHTLGEAALAAAANANAVISFVVAVVMGIGMAASILIG 86
           FL  L+ +++  L+ ++  +WVG  +  AA    + A A+   +     GI      L  
Sbjct: 255 FLMNLYLSIVLTLH-NMAFLWVGGPIHVAAYGVVSYAEALFYLIFE---GIAFGTQPLFS 310

Query: 87  QSLGAKDIAQAKRVVGTGATFFVGLAVLIALAAAVLTGRIVARMQAPP-----------E 135
            + GAK   +           F  L ++I +        +V    AP            E
Sbjct: 311 FNTGAKRFDRV----------FETLRLVIIMTLVTALAGVVFIYWAPEYLVYIFAGDNSE 360

Query: 136 VLPLAVAYLRVLFLAMPFQ 154
           + P+A+  +R+ F  +PF+
Sbjct: 361 LAPVAIEGMRLYFWGLPFE 379