Pairwise Alignments

Query, 476 a.a., MATE family efflux transporter from Ralstonia solanacearum PSI07

Subject, 455 a.a., MATE efflux family protein (RefSeq) from Shewanella loihica PV-4

 Score =  114 bits (285), Expect = 7e-30
 Identities = 100/403 (24%), Positives = 182/403 (45%), Gaps = 5/403 (1%)

Query: 18  PIAGTLFALFLPILFGNLMQALNGSVNAMWVGHTLGEAALAAAANANAVISFVVAVVMGI 77
           PI   L  + LP L G L       V+  ++   LG  ALAA +    V   V ++ +GI
Sbjct: 11  PIGRVLLNMSLPNLIGILTILGFSLVDTFFISQ-LGTEALAAISFTFPVTLIVSSIAIGI 69

Query: 78  GMAASILIGQSLGAKDIAQAKRVVGTGATFFVGLAVLIALAAAVLTGRIVARMQAPPEVL 137
           G   S  +G+ +G+ +  +AK  +         L   ++L  ++  G +   + A  + L
Sbjct: 70  GAGVSTNLGRLIGSGNSPKAKVFLHDALLITFWLIAALSLLGSLFIGPLFTLLGANDDSL 129

Query: 138 PLAVAYLRVLFLAMPFQAAYIFLTILLRSTGDSKTPFRFQIVCVGLDIALNPLLIVGWGP 197
           PL   Y+ + +L  P     +     LR+TGD+K+P +   +   +++ L+PLLI G GP
Sbjct: 130 PLIRDYMFLWYLGAPLLVLLMVGNQGLRATGDTKSPAKIMALAAVINLVLDPLLIFGLGP 189

Query: 198 LPALGIAGSATATLMAQGIGLMALAGRLYRTRHILCLRADETHLLRPDPRILKALIVKGL 257
            P L I G+A ATL++  + L      L   R+++         +  + R L  +     
Sbjct: 190 FPRLEIQGAAIATLISWVVALSLSGYLLIIKRNLVDFAEFNLERIHCNWRQLAHI---AQ 246

Query: 258 PMGLHMAVVSLAMVMMMSLVNRFGAQLSAAYGACLHLWNYIQLPVLAMGMTVTPMAAQNL 317
           P  L   +  +A  ++M+++ R      AA+GA   L + + + V+A+  ++ P  AQNL
Sbjct: 247 PAALMNLLNPVANAIIMAMLARIDHSAVAAFGAGTRLESVLLIAVMALSSSLVPFIAQNL 306

Query: 318 GARRLDRVGRIALAGIALNVTMAGGMVLVSQCFSGAVLGMFLPARMETLQAAQHINAMVA 377
           GA + +R     +  +   +     + L     +  +  +F          + +I A+ A
Sbjct: 307 GAGQTERARDALMLSLRFVLVFQTLIYLPLALMATPIAQLFSKDPQVIEWLSFYIIALPA 366

Query: 378 WSFIPFGVTFVLASIIRASGTAMPPLVILFVALWCIRLPAAAV 420
            ++ P G+  + A+ + A    M  LV+    L+ + LP AA+
Sbjct: 367 -AYGPLGMVILTATSLNAYHRPMSSLVLNVCRLFLLLLPLAAL 408