Pairwise Alignments

Query, 514 a.a., D-xylose ABC transporter ATP-binding protein from Ralstonia solanacearum GMI1000

Subject, 501 a.a., fused D-ribose transporter subunits of ABC superfamily: ATP-binding components (NCBI) from Escherichia coli BW25113

 Score =  410 bits (1054), Expect = e-119
 Identities = 228/501 (45%), Positives = 324/501 (64%), Gaps = 13/501 (2%)

Query: 6   LFEMRSIVKAFSGVRALDGVSLAVRPGECVGLCGENGAGKSTLMKVLSGVYPYGTYEGEI 65
           L +++ I KAF GV+AL G +L V PG  + L GENGAGKST+MKVL+G+Y      G +
Sbjct: 4   LLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDA--GTL 61

Query: 66  LWDGAPLRAHSVRDSEHAGIVIIHQELMLVQQLSVAENIFLGNEITKPGGRMDYDAMHRK 125
           LW G        + S+ AGI IIHQEL L+ QL++AENIFLG E     G++D+  M+ +
Sbjct: 62  LWLGKETTFTGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKTMYAE 121

Query: 126 AEELLARLRLTDVNVAAPVMNYGSGHQQLFEIAKALAKNARLLILDEPTSSLSAKEIEVL 185
           A++LLA+L L   +    V +   G QQ+ EIAK L+  ++++I+DEPT +L+  E E L
Sbjct: 122 ADKLLAKLNLRFKSDKL-VGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETESL 180

Query: 186 LSIIEDLKRGGVACVYISHKLDEVKRVCDTITVIRDGKHIGTRPAAELDINGIITMMVGR 245
             +I +LK  G   VYISH++ E+  +CD +TV RDG+ I  R  A L  + +I MMVGR
Sbjct: 181 FRVIRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVASLTEDSLIEMMVGR 240

Query: 246 EMTSLFPKVEHTVGDVVLEARNVTCWDVTNPNRKRVDDVSFSVRRGEILGVAGLVGAGRT 305
           ++   +P ++   GD+ L+  N+       P    V+DVSF++R+GEILGV+GL+GAGRT
Sbjct: 241 KLEDQYPHLDKAPGDIRLKVDNLC-----GPG---VNDVSFTLRKGEILGVSGLMGAGRT 292

Query: 306 EMVSALFGAYPGRSSAQVLVEGKPVKVHSPAQAIAHGICLVPEDRKRHGIVPLMGVGENI 365
           E++  L+GA P R+S  V ++G  V   SP   +A+GI  + EDRKR G+V  M V EN+
Sbjct: 293 ELMKVLYGALP-RTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENM 351

Query: 366 TLATLAQYAR-GLRVDKGAELMTVDREIKRLRIKTASPALSIASLSGGNQQKAVLTKMVL 424
           +L  L  ++R G  +    E   V   I+   +KT S   +I  LSGGNQQK  + + ++
Sbjct: 352 SLTALRYFSRAGGSLKHADEQQAVSDFIRLFNVKTPSMEQAIGLLSGGNQQKVAIARGLM 411

Query: 425 ACPKVLILDEPTRGVDVGSKYDIYQMIADLAASGVAIIMVSSELPEILGMSDRVLVIGEG 484
             PKVLILDEPTRGVDVG+K +IYQ+I    A G++II+VSSE+PE+LGMSDR++V+ EG
Sbjct: 412 TRPKVLILDEPTRGVDVGAKKEIYQLINQFKADGLSIILVSSEMPEVLGMSDRIIVMHEG 471

Query: 485 ELRGDFANQGLTQERILAAAI 505
            L G+F  +  TQE ++AAA+
Sbjct: 472 HLSGEFTREQATQEVLMAAAV 492