Pairwise Alignments

Query, 523 a.a., DNA polymerase Y family protein from Ralstonia solanacearum GMI1000

Subject, 472 a.a., conserved hypothetical protein from Agrobacterium fabrum C58

 Score = 97.8 bits (242), Expect = 8e-25
 Identities = 129/503 (25%), Positives = 198/503 (39%), Gaps = 65/503 (12%)

Query: 43  VVATNRAAAREGVQPGLRRAGMQALVPHALQLARDPAAEARLVQALAL-ALLALTPHVCL 101
           V A + AA + GV  G+  A  QAL    + +  DPA +A  ++ + L AL   +P V +
Sbjct: 11  VSAADAAARQAGVHVGMPAAKAQALFRGLMLVDADPAMDAAALERITLWALTLYSPIVAV 70

Query: 102 DLADEATVLLEVQASLRLFGGHRALCRAVRRYARCLGLVPQIGTGTTGRGAAWLASAHAM 161
           D  D   ++++ + +  L GG   +   +        L P++    T   A   A A + 
Sbjct: 71  DGIDG--IVMDTEGADHLQGGELPMVTKIANQFLARKLTPRVAIADTWGAAHACARAISR 128

Query: 162 RGRGAQPVRIRRAVRPARMAVLLDGLPIETVARLTRPDWLEGLGCRTLADLRGLPRGGLR 221
                      RAV   ++ + L  LP   V+ L        LG +T+ +L   PR  L 
Sbjct: 129 ETVIVPSGETVRAVE--KLPISLLRLPGNVVSDLRT------LGFQTVGELANTPRAPLT 180

Query: 222 RRCGPLLVDTLDAGYGEAHERFTWFAAPMRFDVPLELPGRIDSAEGVLAAAEQLLLQLTG 281
            R GP +   LD  +G A E           +V       I +AE +     +L++QL  
Sbjct: 181 LRFGPEIGRRLDQMFGRACEPIDPIRTAELIEVSRAFAEPIGAAETIDKYVGRLVVQLIE 240

Query: 282 WLAAHQLGAKGYRLTLEHERRRG-RDAQDAASSTPVDILLAQPVRTLAHLSRVLRERVHR 340
            L    LG +  R  L  E+  G R A  A +         +PVR +A L+++ R+R  +
Sbjct: 241 ELQRRGLGVR--RADLIVEKVDGVRQAIRAGT--------VKPVRDVAWLTKLFRDRTEK 290

Query: 341 LTLIAPVVELRLTVTDAVPLAPPTGALFPAPGARAEDAARLIDTLIARLG--AANVLHPQ 398
           +     + +L L    A PL     +      +  ED    +  LI   G     V    
Sbjct: 291 IEPGFGIEKLTLVAVMAEPLEERQKS-----SSLVEDEVTDVTPLIDIYGNRGQRVYRVA 345

Query: 399 PCADHRPERA----------------NHWAEVNAATTASGRAAARQALAQWHARQPERPL 442
           P A   PER+                +HW           R  AR  L +  A  P+RP 
Sbjct: 346 PVASDVPERSVQRISPAADPIEVTWVSHWRR-------PVRLLARPELIEAIALLPDRP- 397

Query: 443 WLLEQPIPLLTRRHYPYYRGPLRLVSLPERIESGWWD-DALIK--RDYFIAEGEGAVRYW 499
                P+ +  R      R  ++    PERI   WW  DA ++  RDYF+ E E   R W
Sbjct: 398 -----PVSITWRGK----RRKVKRADGPERIFGEWWQRDAEMEAVRDYFVIEDEAGERLW 448

Query: 500 IYRERVSATAGEDEARWYLHGLF 522
           ++R            RW++HG+F
Sbjct: 449 VFRSGDGIDPDTGSHRWFVHGIF 471