Pairwise Alignments

Query, 532 a.a., chromosomal replication initiator protein DnaA from Ralstonia solanacearum GMI1000

Subject, 520 a.a., chromosomal replication initiator protein DnaA from Agrobacterium fabrum C58

 Score =  227 bits (578), Expect = 9e-64
 Identities = 165/537 (30%), Positives = 265/537 (49%), Gaps = 56/537 (10%)

Query: 2   APGKHQTITMQDFWHAASAQLESELTPQQFKTWIKPLTPLSFDEQACMLRIAAPNRFKLD 61
           A G    +     +   SA+L++++ P+ + +W   L   +  +   ++R   P  F   
Sbjct: 27  AAGDKSAMMHDALFERFSARLKAQVGPEVYASWFARLKLHTVSKS--VVRFTVPTTFLKS 84

Query: 62  WVKSQFSGRIQSLACDYWEMQVDVQFVLDPTAGQRQAAMQPALAPMPMQPLAAQTMQAQA 121
           W+ +++   I SL      +Q +   VL      R A+        P++P  AQT +   
Sbjct: 85  WINNRYMDLITSL------VQSEDPDVLKVEILVRSASR-------PVRP--AQTEERAQ 129

Query: 122 VPREAPARPTMAPYRETPMATAAHAAADIDVPVMDAAEASTQSYRVPAPAAPAVMGGLSA 181
             +E  A P    +  +  ATA  A                     P  A   +  G S 
Sbjct: 130 PVQEVGAAPRNKSFIPSQSATAPAAQ--------------------PMAAQATLRQGGSG 169

Query: 182 PPAAPVDDTVHERSRLNPILTFDNLVTGKANQLARAAAVQVANNPGKS--YNPLYLYGGV 239
           P            S L+   TFD  V G +N++A AAA  +A     +  +NPL+++ GV
Sbjct: 170 PLFG---------SPLDTRFTFDTFVEGSSNRVALAAAKTIAEAGAGAVRFNPLFIHAGV 220

Query: 240 GLGKTHLIHAIGNFMLMENPRARIRYIHAEQYVSDVVKAYQRKAFDDFKRYYHSLDLLLI 299
           GLGKTHL+ AI N  +      R+ Y+ AE ++     A +       K    ++DLL+I
Sbjct: 221 GLGKTHLLQAIANAAIDSPRNPRVVYLTAEYFMWRFATAIRDNDALTLKDTLRNIDLLVI 280

Query: 300 DDIQFFSGKNRTQEEFFYAFEALIANRAQVIITSDTYPKEITGIDDRLISRFDSGLTVAI 359
           DD+QF  GK   Q EF +    L+ +  QV++ +D  P E+  +D R+ SR   G+ + I
Sbjct: 281 DDMQFLQGK-MIQHEFCHLLNMLLDSAKQVVVAADRAPWELESLDPRVRSRLQGGMAIEI 339

Query: 360 EPPELEMRVAILMKKAQAENVTVP-----EEVAFFVAKHLRSNVRELEGALRKILAYSNF 414
           E P+ +MR  +L ++  +     P     +E+   VAK + ++ RELEGA  +++   +F
Sbjct: 340 EGPDYDMRYEMLNRRMGSARQDDPSFEISDEILTHVAKSVTASGRELEGAFNQLMFRRSF 399

Query: 415 HGKEITIEVTREALKDLL-TVQNRQISVENIQKTCADFYNIKVADMYSKKRPANIARPRQ 473
               ++++   E L  L+ + + +++ +E+IQ+  A  YN+   ++ S +R   I +PRQ
Sbjct: 400 E-PNLSVDRVDELLSHLVGSGEAKRVRIEDIQRIVARHYNVSRQELVSNRRTRVIVKPRQ 458

Query: 474 IAMYLAKELTQKSLPEIGELFGGRDHTTVLHAVRKIADERSKDAQLNHELHVLEQTL 530
           IAMYLAK LT +S PEIG  FGGRDHTTVLHAVRKI D  S D +L HE+ +L++ +
Sbjct: 459 IAMYLAKMLTPRSFPEIGRRFGGRDHTTVLHAVRKIEDLISGDTKLGHEVELLKRLI 515