Pairwise Alignments

Query, 509 a.a., ABC transporter substrate-binding protein from Ralstonia solanacearum GMI1000

Subject, 519 a.a., ABC transporter substrate binding protein (oligopeptide) from Agrobacterium fabrum C58

 Score =  385 bits (990), Expect = e-111
 Identities = 202/502 (40%), Positives = 288/502 (57%), Gaps = 3/502 (0%)

Query: 4   ISPQALATDLKIGMSSPPTSMDPHFYNLFSNINVSEHMFECLVKMDADSHIVPGLAESWK 63
           ++   +A +L IG+S   TS+DPHFYN   N  ++  +F+ L +  A+  +V GLA  W 
Sbjct: 16  VAQPVMAKNLTIGLSGTVTSIDPHFYNASPNNAIAMQIFDRLTERTAEGRLVEGLATKWD 75

Query: 64  MVNNLTWEFKLRPGVKFHDGSELTTEDVAWSLDRPATIVNSPGKFDTYTKAIIHKKIIDK 123
            V+   W F LR GVK+HDG   T++DV ++LDR  ++ NSPG F  + + I   +    
Sbjct: 76  TVSETKWRFALRDGVKWHDGKPFTSDDVIFTLDRAGSVPNSPGGFGGFMRNIASVEADGD 135

Query: 124 YTIQLTTSQPYPLMLSDLTSVFIVQKKATQGLSSDDFAQGKGMVGTGPFKFVSYARDDRV 183
             + ++T  P P +  DL ++ IV + A +G  + D+  GK  +GTG F+  ++ +   V
Sbjct: 136 NAVIISTKAPAPTLPGDLANIAIVSRHAGEGADTADYNSGKAAIGTGAFRLTTFKQGIEV 195

Query: 184 ELVRNDQYWGPKPAWDKVTLRFIPNGATRIAALLSGDVQAIENVPTPDLARVRGDASLNF 243
            L RN  +WG K AWD  T R I + + R  A L+GDV  I+     D+AR +  A+L+F
Sbjct: 196 GLERNPDWWGKKVAWDHATYRMISSASARTTAALAGDVDVIDAPAATDIARFKTTANLSF 255

Query: 244 FSKISHRVIYLYTDDKRDP-TPDVTGKDGKPLAKNPLKDPRVRRAMSMTINRQGIKDRIM 302
            S    RVIYL      D     V G  G+ L  NPL DPRVR A+S  INR+GI D+IM
Sbjct: 256 VSTPGLRVIYLAPSTSGDAWKAFVKGPKGEALDNNPLADPRVRNALSEAINREGIVDKIM 315

Query: 303 EGLAEPTDNLVPPQLFGYNPNLKTLKYDPEGAKKLLAEAGYPDGFGITLHTPNNRYVNDE 362
           EG A  +   +P   F Y P+++  K D  GAKKLLA+AGYPDGF +T+H PN+RY N  
Sbjct: 316 EGTATASGQWLPKGAFSYTPDIQPPKPDAAGAKKLLADAGYPDGFQLTVHVPNDRYPNAP 375

Query: 363 KIAQTIAQNLTRIGIVTKVEGMPMATFAAKSIRHEYSFGLVGWGAQTGEVSSPLRALVAC 422
            + Q +AQ  TRIG+ T VE +P  TF+++  + E++  L+G G  T + SS L  ++  
Sbjct: 376 AVVQAVAQMWTRIGVKTNVEALPWTTFSSR--KSEFAMKLLGLGNATYDASSMLVNVLGT 433

Query: 423 EDARKGYGTVNWGQYCNPKMDAVLDKALYTMDDKERSRLLQEATAIVVDDGGIIPVHFQV 482
            D ++G G  N   Y NP +D ++ KA+   DDK R   L EA  + + DG IIP++ Q 
Sbjct: 434 VDPKRGLGAANDSGYSNPALDDLVSKAMMIYDDKAREAALIEAVKVAITDGAIIPLYQQS 493

Query: 483 TTWAARKGFTYTPRTDERTYAQ 504
             W  RKG  Y PR DERT A+
Sbjct: 494 NAWVLRKGLNYAPRIDERTLAK 515