Pairwise Alignments

Query, 509 a.a., ABC transporter substrate-binding protein from Ralstonia solanacearum GMI1000

Subject, 521 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  229 bits (585), Expect = 1e-64
 Identities = 162/498 (32%), Positives = 254/498 (51%), Gaps = 29/498 (5%)

Query: 2   AGISPQALATDLKIGMSSPPTSMDPHFYNLFSNINVSEHMFECLVKMDADSHIVPGLAES 61
           A I+  A A  L+ G  +   S+DP+     SN+    H++E LV+   D  I P LA  
Sbjct: 15  AAIAVPAHAETLRWGGRADLYSLDPYSVPSTSNLAFLNHIYEGLVRYGPDFQIEPALATE 74

Query: 62  WKMVNNLTWEFKLRPGVKFHDGSELTTEDVAWSLDRPATIVNSPGKFDTYTKAIIHKKII 121
           WK+++   W F LR GVKFHDGS+ T +DV  S  R A+   SP + +    A + K  +
Sbjct: 75  WKLIDGKAWRFTLRKGVKFHDGSDFTADDVVASFTR-ASDATSPLRGNIPVFAGVKK--V 131

Query: 122 DKYTIQLTTSQPYPLMLSDLTSVFIVQKKATQGLSSD---DFAQ------GKGMVGTGPF 172
           D YT+ L  S P  L L+D+T++FI   K  +  +S+   DFA            GTGPF
Sbjct: 132 DDYTVDLEVSAPTSLFLNDITNIFIFNAKWLKDNNSEKPTDFASKVDGYTTMHTNGTGPF 191

Query: 173 KFVSYARDDRVELVRNDQYWGPKP-AWDKVTLRFIPNGATRIAALLSGDVQAIENVPTPD 231
           K  S   D +  LV N+ +W  K    D++    I + ATR+AALLSG++  I++ P  D
Sbjct: 192 KLESRVPDSKTVLVANEGWWDQKKHNLDRIEFVPIASAATRVAALLSGEIDLIDSAPIQD 251

Query: 232 LARVRGDASLNFFSKISHRVIYLYTDDKRDPTPDVTGKDGKPLAKNPLKDPRVRRAMSMT 291
           L R+    +++   +   R +++  + +         +DGKP   NP  D RVR+A   +
Sbjct: 252 LPRLESSPNISVKKRTELRTLFIGFNRREKL------EDGKP---NPFNDLRVRQAFEAS 302

Query: 292 INRQGIKDRIMEGLAEPTDNLVPPQLFGYNPNLKTLK-YDPEGAKKLLAEAGYPDGFGIT 350
           I+R  I  ++M GLA P+ +L+ P++ GY  +L T +  DP  A+KLLA+AG  +    T
Sbjct: 303 IDRDLINKKVMRGLARPSGSLIAPEIAGYAKSLDTFEPADPAKAQKLLADAGMKN-LAFT 361

Query: 351 LHTPNNRYVNDEKIAQTIAQNLTRIGIVTKVEGMPMATFAAKSIRHEYSFGLVGWGAQ-T 409
               N+  VN+E I   +A  L R G    ++  P +  + K    +     + W  + T
Sbjct: 362 YTCMNDESVNEEDICSGVANMLKRGGFQPTIDIAPRSVQSPKRNGGKADVFNLSWANEPT 421

Query: 410 GEVSSPLRALVACEDARKG-YGTVNWGQYCNPKMDAVLDKALYTMDDKERSRLLQEATAI 468
            +  S L  +++    RKG  G  N+G + NP++D ++ +A    D+ +R  L + A  I
Sbjct: 422 LDAFSMLSQILS---TRKGAMGVSNYGGWSNPEIDKLVAQAAQEQDNTKRLALEEAALKI 478

Query: 469 VVDDGGIIPVHFQVTTWA 486
             D+  ++P+H Q   WA
Sbjct: 479 AKDETMLVPLHQQPIAWA 496