Pairwise Alignments

Query, 200 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Ralstonia solanacearum GMI1000

Subject, 276 a.a., predicted amidase and lipoprotein (NCBI) from Escherichia coli BW25113

 Score = 79.7 bits (195), Expect = 4e-20
 Identities = 52/124 (41%), Positives = 63/124 (50%), Gaps = 21/124 (16%)

Query: 94  QFAPCDARAWHAGVSDFFGRTRCNDFSIGIEIEGTDDQ---------PFTPAQYAATAAL 144
           Q  P    AWHAG+S + G TR ND SIGIE+E    Q         PF PAQ  A   L
Sbjct: 89  QLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPL 148

Query: 145 VRAICAAYPIRA--IAGHSDIAPGRKTDPGPCFDWAHLRRLAKLEAALFP-------YQA 195
            + I A Y I+   +  H+DIAP RK DPGP F W   ++LA+     +P       Y A
Sbjct: 149 AKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPW---QQLAQQGIGAWPDAQRVNFYLA 205

Query: 196 GAAP 199
           G AP
Sbjct: 206 GRAP 209