Pairwise Alignments

Query, 200 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Ralstonia solanacearum GMI1000

Subject, 270 a.a., N-acetylmuramoyl-L-alanine amidase from Bosea sp. OAE506

 Score = 89.0 bits (219), Expect = 7e-23
 Identities = 64/176 (36%), Positives = 78/176 (44%), Gaps = 36/176 (20%)

Query: 23  PSPNVDARP------EGLPI-------DLIVLHNISLPPARFGTDDVLDFFANTLDCGAH 69
           PSPN   R       EG P        D+++LH   +P A     + L +  N +     
Sbjct: 17  PSPNHGERKGGTAAQEGSPAEGAPRRPDMLILHYTGMPNA----GEALQWLCNPVS---- 68

Query: 70  PYFEQLRGVRVSAHFFIRRTGACVQFAPCDARAWHAGVSDFFGRTRCNDFSIGIEIEGTD 129
                    +VS+H+F+   G  +Q  P   RAWHAG S + G T  N  SIGIEI    
Sbjct: 69  ---------QVSSHYFVFENGHTLQLVPEARRAWHAGASHWAGETDINSCSIGIEIANPG 119

Query: 130 D----QPFTPAQYAATAALVRAICA--AYPIRAIAGHSDIAPGRKTDPGPCFDWAH 179
                  F   Q AAT  L R IC   A P   +  HSDIAPGRK DPG  F W H
Sbjct: 120 HPGGLPDFQQEQIAATLNLCRDICERWAIPRERVLAHSDIAPGRKIDPGEKFPWRH 175