Pairwise Alignments

Query, 954 a.a., excinuclease ABC subunit UvrA from Ralstonia solanacearum IBSBF1503

Subject, 1038 a.a., excinuclease ABC subunit UvrA from Variovorax sp. OAS795

 Score = 1372 bits (3552), Expect = 0.0
 Identities = 693/1017 (68%), Positives = 811/1017 (79%), Gaps = 77/1017 (7%)

Query: 2    EAIKIRGARTHNLKNINLDLPRNQLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61
            + I IRGARTHNLKN++LD+PRN+LVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA
Sbjct: 32   QRISIRGARTHNLKNVDLDIPRNKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 91

Query: 62   RQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARAGTPYCP 121
            RQFLQLM+KPDVD+IEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARAGTPYCP
Sbjct: 92   RQFLQLMDKPDVDVIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARAGTPYCP 151

Query: 122  EHGQPLEAQSVSQMVDAALALPADTKLMILAPVVVNRKGEHVDLFEAMQAQGFVRFRVRS 181
            EH  PL+AQ+VSQMVDA LA+P + +LMILAPV   +KGE ++LF  MQA G+VRFRV  
Sbjct: 152  EHHLPLQAQTVSQMVDATLAIPDEPRLMILAPVAREKKGEFLELFAEMQAAGYVRFRV-- 209

Query: 182  GGGTAHEAQAKVYEVDTLPKLKKNDKHTIDVVVDRVKVNPELKQRLAESFETALRLADGR 241
                      + YE + LPKLKK +KH IDVV+DR++  P+++QRLAESFE ALRLA+GR
Sbjct: 210  --------DGQTYEYNDLPKLKKTEKHDIDVVIDRLRARPDMQQRLAESFEAALRLAEGR 261

Query: 242  AVALEMDT----------------GKEHVFSSKFACPICAYSLQELEPRLFSFNNPMGAC 285
            A+ALE+                   KEH+F++KFACPIC YSL ELEPRLFSFN+P+GAC
Sbjct: 262  AIALELGARPESSADGAAGAAAAADKEHLFNAKFACPICHYSLSELEPRLFSFNSPVGAC 321

Query: 286  PHCDGLGQITFFDPKRVVAFPNLSLASGAIKGWDRRNQFYFQMLQSLAAFYDFDTDTPFE 345
            P CDGLG    FDP RVVAFP LSLASGAIKGWDRRN +YF M++S+A  Y FD D PFE
Sbjct: 322  PSCDGLGHREVFDPARVVAFPTLSLASGAIKGWDRRNSYYFSMIESVAKHYKFDVDAPFE 381

Query: 346  ELPKAVQDVVLQGSDQQQIPFTYINERG----RTTVREHAFEGIIPNLERRYKETDSIAV 401
             LP +VQ V+L GS  ++I F Y  E G    +   ++H FEGIIPN+ RRY+ETDS+ V
Sbjct: 382  SLPASVQQVLLHGSAAEEIKFNYTMESGNFAGKKLTKKHPFEGIIPNMARRYRETDSVMV 441

Query: 402  REELAKYQNNQACPECEGTRLRREARHVKIGDDGQA---------RAIYEINGWPLRDAL 452
            RE+LA+++N Q CP+C G+RLR EAR+V + D+             AI+E++   LRD+L
Sbjct: 442  REDLARFRNLQPCPDCGGSRLRPEARNVFLVDESARPADGGEPPRMAIFELSHLTLRDSL 501

Query: 453  TYFLTLNLHGAKREIADKIVQEITSRLNFLNNVGLDYLSLERSADTLSGGEAQRIRLASQ 512
             +F TL L GAK +IADK+V+EI  RL FLN+VGL+YLSL+RSA+TLSGGEAQRIRLASQ
Sbjct: 502  AWFQTLKLRGAKADIADKVVREIGLRLKFLNDVGLNYLSLDRSAETLSGGEAQRIRLASQ 561

Query: 513  IGSGLTGVMYVLDEPSIGLHQRDNDRLIGTLKHLRDLGNSVLVVEHDEDMIRASDHVVDI 572
            IGSGLTGVMYVLDEPSIGLHQRDNDRLIGTLKHLRD+GNSV+VVEHDEDMI A+DHV+D+
Sbjct: 562  IGSGLTGVMYVLDEPSIGLHQRDNDRLIGTLKHLRDIGNSVIVVEHDEDMIHAADHVIDM 621

Query: 573  GPGAGVHGGQVIAEGTPGQIEQSPGSLTGEYLSGKRRIEVPPQRTA-------------- 618
            GPGAG+HGG+V+A+G+  Q+  +P SLTG+YLSG ++IEVP  RTA              
Sbjct: 622  GPGAGIHGGRVMAQGSYAQVAANPDSLTGQYLSGAKKIEVPRHRTAWLPVVKKPAFNDGK 681

Query: 619  --------PDEERW----------------LRIVNASGNNLKNVNADIPVGLLTCVTGVS 654
                    P  ER                 +R+V A+GNNLKNV+   PVGLLTCVTGVS
Sbjct: 682  KASRFPPSPAAERRAAREAAHLASQTDLQEIRVVGATGNNLKNVSVAFPVGLLTCVTGVS 741

Query: 655  GSGKSTLINDTLYNAVARHLYGSTPEPTAHDRIDGLEHFDKVINVDQSPIGRTPRSNPAT 714
            GSGKSTL+NDTLY AVAR LY +  EP AH+ ++G+E+FDKVINVDQSPIGRTPRSNPAT
Sbjct: 742  GSGKSTLVNDTLYTAVARTLYRAHEEPAAHESVEGIEYFDKVINVDQSPIGRTPRSNPAT 801

Query: 715  YTGLFTPIRELYAGVPAAKERGYDPGRFSFNVKGGRCEACQGDGVLKVEMHFLPDVYVPC 774
            YTGLFTPIREL A    A+ERGY PGRFSFNV GGRCEACQGDGV+KVEMHFLPDVYVPC
Sbjct: 802  YTGLFTPIRELMAETNTARERGYGPGRFSFNVAGGRCEACQGDGVVKVEMHFLPDVYVPC 861

Query: 775  DVCHGKRYNRETLEVLYKGKNITEVLEMTVEQAHEFFAPVPVVRRKLQTLLDVGLGYIRL 834
            +VCHG+RYNRETLEV YKG+NI ++LEMTVE AHEF   VP + RKL+TLLDVGL YI+L
Sbjct: 862  EVCHGQRYNRETLEVQYKGRNIAQILEMTVETAHEFLKAVPTIERKLRTLLDVGLSYIKL 921

Query: 835  GQSATTLSGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIELLLKVIYKLRDHGN 894
            GQSATTLSGGEAQRVKL+LELSKRDTGRTLYILDEPTTGLHF DIELLLKV+++LRD GN
Sbjct: 922  GQSATTLSGGEAQRVKLALELSKRDTGRTLYILDEPTTGLHFADIELLLKVLHQLRDAGN 981

Query: 895  TIVIIEHNLDVIKTADWLLDLGPEGGAGGGQIIAKGTPEEVAKSRASFTGKYLAPLL 951
            TIV+IEHNLDVIKTADWL+D+GPEGGAGGG ++ +GTPE++A + AS TG+YL  LL
Sbjct: 982  TIVVIEHNLDVIKTADWLIDMGPEGGAGGGTVVGEGTPEDIAANEASHTGRYLKRLL 1038



 Score = 63.5 bits (153), Expect = 7e-14
 Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 15/121 (12%)

Query: 1   MEAIKIRGARTHNLKNINLDLPRNQLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60
           ++ I++ GA  +NLKN+++  P   L  +TG+SGSGKS+L  DTLY           +A 
Sbjct: 709 LQEIRVVGATGNNLKNVSVAFPVGLLTCVTGVSGSGKSTLVNDTLY-----------TAV 757

Query: 61  ARQFLQLMEKP----DVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARAG 116
           AR   +  E+P     V+ IE     I+++Q      PRS   T T +   +R L A   
Sbjct: 758 ARTLYRAHEEPAAHESVEGIEYFDKVINVDQSPIGRTPRSNPATYTGLFTPIRELMAETN 817

Query: 117 T 117
           T
Sbjct: 818 T 818