Pairwise Alignments

Query, 551 a.a., methyl-accepting chemotaxis protein from Rahnella sp. WP5

Subject, 553 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  362 bits (928), Expect = e-104
 Identities = 218/519 (42%), Positives = 313/519 (60%), Gaps = 8/519 (1%)

Query: 4   IRDIKIRTVLITILITFSLLWAGVSGFALYSLNQLKSELNFTNVQQQNGDIINGANAQYY 63
           ++ IKI T L+ +L  F LL     G    SL   K         +Q    +N    +  
Sbjct: 2   LKRIKIVTSLLLVLALFGLLQLTSGGLFFNSLKNDKENFTVLQTIRQQQSALNATWVELL 61

Query: 64  RAVTALERAMAGLEKNNNGIYDIEIKATLIE-----LESLKKGLDQFKNIDHGNLDSNTV 118
           +    L RA      + + I      A L++     L+  +K  +Q++ +      S   
Sbjct: 62  QTRNTLNRAGIRWMMDQSNIGSGATVAELMQGATNTLKLTEKNWEQYEALPRDPRQSEAA 121

Query: 119 EDIYNSSFTLFNSAVFPMYESAAVKNTSLFTSLKNDKYLPLRRNFSAAIEKYNDKITSLN 178
                 ++ +++ A+  + +       + F       Y         A  + ND++  + 
Sbjct: 122 FLEIKRTYDIYHGALAELIQLLGAGKINEFFDQPTQSYQDAFEKQYMAYMQQNDRLYDIA 181

Query: 179 AEANHRITQWVAWCQYILIGAMALSVVIMLLSDRYLANFLVKPLNKVKAHLESLATGILD 238
            E N+       W   +L+  +   +V+++     +   L+ P+N++   +  +A+G L 
Sbjct: 182 VEDNNSSYNQAMW---VLVSVLIAVLVVIIAVWFGIKLSLIAPMNRLIESIRHIASGDLV 238

Query: 239 SKIAFQGKNCVGQLIPYINKMQDNWAKTVYDIRNSADSIYKGSSEISTGNTDLSSRTEEQ 298
            +I  +G N +GQL   +  MQ    +TV D+RN A++IY G+SEI+ GN DLSSRTE+Q
Sbjct: 239 KRIDVEGSNEMGQLAENLRHMQSELMRTVGDVRNGANAIYSGASEIAMGNNDLSSRTEQQ 298

Query: 299 ASALEETAASMEQLSSTVRHNADNASQASTLAEQATQEANQGGVIVNDVISTMVKINASS 358
           A++LEETAASMEQL++TV+ NA+NA QAS LA  A++ A +GG +V++V+ TM  I +SS
Sbjct: 299 AASLEETAASMEQLTATVKQNAENARQASHLALSASETAQKGGKVVDNVVQTMRDIASSS 358

Query: 359 HKIVEIISVINGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSGQAAKEIG 418
            KI +IISVI+GIAFQTNILALNAAVEAARAGEQGRGFAVVA EVRNLAQRS QAA+EI 
Sbjct: 359 QKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAREIK 418

Query: 419 VLINESVENIQSGSEQVTQAGGAMEKIVSSVSRVNDIMSEIAAASTEQSKGINQIGIAVV 478
            LI +SV  +  GS  V  AG  M++IV++V+RV DIM EIA+AS EQS+GI+Q+G+AV 
Sbjct: 419 SLIEDSVSRVDVGSTLVESAGETMDEIVNAVTRVTDIMGEIASASDEQSRGIDQVGLAVA 478

Query: 479 QMDSVTQQNAALVQESAAAAASLEEQARQLTEIVSVFKI 517
           +MD VTQQNA+LV+ESAAAAA+LEEQA +LT+ V+VF+I
Sbjct: 479 EMDRVTQQNASLVEESAAAAAALEEQASRLTQAVAVFRI 517