Pairwise Alignments

Query, 551 a.a., methyl-accepting chemotaxis protein from Rahnella sp. WP5

Subject, 546 a.a., methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor from Escherichia coli BL21

 Score =  338 bits (866), Expect = 4e-97
 Identities = 217/513 (42%), Positives = 309/513 (60%), Gaps = 18/513 (3%)

Query: 12  VLITILITFSLLWAGVSGFALYSLNQ----LKSELNFTNVQQQNGDIINGANAQYYRAVT 67
           +L  IL+ F+L  A ++G+ L+  ++    + +E+        + D +  A     +A  
Sbjct: 24  ILGGILVLFALSSA-LAGYFLWQADRDQRDVTAEIEIRTGLANSSDFLRSARINMIQAGA 82

Query: 68  ALERAMAGLEKNNNGIYDIEIKATLIELESLKKGLDQFKNIDHGNLDSNTVEDIYNSSFT 127
           A   A     K N    + EIK +       ++G   ++N          ++   N  F 
Sbjct: 83  ASRIAEMEAMKRNIAQAESEIKQS-------QQGYRAYQNRPVKTPADEALDTELNQRFQ 135

Query: 128 LFNSAVFPMYESAAVKNTSLFTSLKNDKYLPLRRNFSAAIEK-YNDKITSLN--AEANHR 184
            + + + PM + A         + ++++  PL   ++  + K    + T  N  AE  H+
Sbjct: 136 AYITGMQPMLKYAKNGMFEAIINHESEQIRPLDNAYTDILNKAVKIRSTRANQLAELAHQ 195

Query: 185 ITQWVAWCQYILIGAMALSVVIMLLSDRYLANFLVKPLNKVKAHLESLATGILDSKIAFQ 244
            T+        +IGA  L++V+ L++   L   +++PL      +E +A+G L       
Sbjct: 196 RTRLGGM---FMIGAFVLALVMTLITFMVLRRIVIRPLQHAAQRIEKIASGDLTMNDEPA 252

Query: 245 GKNCVGQLIPYINKMQDNWAKTVYDIRNSADSIYKGSSEISTGNTDLSSRTEEQASALEE 304
           G+N +G+L  ++ +MQ +   TV  +R  A+ IY+G+SEIS GN DLSSRTEEQA+A+E+
Sbjct: 253 GRNEIGRLSRHLQQMQHSLGMTVGTVRQGAEEIYRGTSEISAGNADLSSRTEEQAAAIEQ 312

Query: 305 TAASMEQLSSTVRHNADNASQASTLAEQATQEANQGGVIVNDVISTMVKINASSHKIVEI 364
           TAASMEQL++TV+ NADNA  AS LA++A+ +A+ GG  V+ V+ TM  I+ SS KI EI
Sbjct: 313 TAASMEQLTATVKQNADNAHHASKLAQEASIKASDGGQTVSGVVKTMGAISTSSKKISEI 372

Query: 365 ISVINGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSGQAAKEIGVLINES 424
            +VIN IAFQTNILALNAAVEAARAGEQGRGFAVVASEVR LA RS QAAKEI  LI+ES
Sbjct: 373 TAVINSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLASRSAQAAKEIEGLISES 432

Query: 425 VENIQSGSEQVTQAGGAMEKIVSSVSRVNDIMSEIAAASTEQSKGINQIGIAVVQMDSVT 484
           V  I  GS++V  AG  M  IV +V+ V  IM EIAAAS EQS+GI Q+  A+ +MD VT
Sbjct: 433 VRLIDLGSDEVATAGKTMSTIVDAVASVTHIMQEIAAASDEQSRGITQVSQAISEMDKVT 492

Query: 485 QQNAALVQESAAAAASLEEQARQLTEIVSVFKI 517
           QQNA+LV+E++AAA SLEEQA +LTE V VF++
Sbjct: 493 QQNASLVEEASAAAVSLEEQAARLTEAVDVFRL 525