Pairwise Alignments

Query, 294 a.a., copper homeostasis membrane protein CopD from Rahnella sp. WP5

Subject, 290 a.a., inner membrane protein from Escherichia coli BL21

 Score =  207 bits (528), Expect = 2e-58
 Identities = 114/293 (38%), Positives = 177/293 (60%), Gaps = 7/293 (2%)

Query: 3   LTALFVLCRFMHFASLMQIFGLSVFCSLLTPAGFSAVLLRKNQTLMICSALVAAVTSVGM 62
           L   ++  RF+HF SLM +FG +++ + L P     +L ++   L   +A+ + +++  M
Sbjct: 2   LAFTWIALRFIHFTSLMLVFGFAMYGAWLAPLTIRRLLAKRFLRLQQHAAVWSLISATAM 61

Query: 63  LAIQAALMGNGWSDALNLNVWLLVLTTAFGEVWRWHLLLTAALLLVLLMDWLPARNM--L 120
           LA+Q  LMG GW+D  + N+W  VL T FG VW W ++L    L+V LM     RNM  L
Sbjct: 62  LAVQGGLMGTGWTDVFSPNIWQAVLQTQFGGVWLWQIVLALVTLIVALMQ---PRNMPRL 118

Query: 121 VFLCSCGLLMSQALVGHAAMHEGLPGLVQRTNHVVHLLSAAYWFGCLLPLLICMGYTRQP 180
           +F+ +       A VGHA ++EG+   + +TNH +HL+ AA WFG LLP+L CM   +  
Sbjct: 119 LFMLTTAQFFLLAGVGHATLNEGVTEKIHQTNHAIHLICAAAWFGGLLPVLWCMQLIK-G 177

Query: 181 SARPYAIATLIRFSLWGHAAVALVILTGIINTAIILQRWPTDMTSLYQCLLVVKVIMVGM 240
             R   I  L+RFS  GH AV  V+ +G++N A+++  +P  +T+ +  LL++K I+V +
Sbjct: 178 RWRHQTIQALMRFSWCGHFAVIGVLASGVLN-ALLITGFPPTLTTYWGQLLLLKAILVMI 236

Query: 241 MVAVAVFNRYRLVPLMGKEPDRAQHYFIMMTWLEWGLALGVLLLVSVFATLAP 293
           +V +A+ NRY LVP M ++ DRA   F+ MT LEW +   VL+++S+ ATL P
Sbjct: 237 IVVIALANRYVLVPRMRQDEDRAAPLFVWMTKLEWAIGAVVLVIISLLATLEP 289