Pairwise Alignments

Query, 668 a.a., excinuclease ABC subunit B from Rahnella sp. WP5

Subject, 897 a.a., UvrABC system protein B from Xanthobacter sp. DMC5

 Score =  772 bits (1994), Expect = 0.0
 Identities = 393/664 (59%), Positives = 488/664 (73%), Gaps = 4/664 (0%)

Query: 5   FKLHSEFKPSGDQPEAIRRLEEGLENGLAHQTLLGVTGSGKTFTVANVIADLNRPTMVLA 64
           F + S+F+P+GDQP+AI+ L    E G   Q LLGVTGSGKTFT+A VI  L RP +VLA
Sbjct: 100 FTMKSDFQPAGDQPQAIKELCAQAEAGDRDQVLLGVTGSGKTFTMAKVIEKLQRPAIVLA 159

Query: 65  PNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRL 124
           PNKTLAAQLYGE K FFP+NAVEYFVSYYDYYQPEAYVP +DT+IEK++S+NE I++MR 
Sbjct: 160 PNKTLAAQLYGEFKSFFPDNAVEYFVSYYDYYQPEAYVPRTDTYIEKESSINEQIDRMRH 219

Query: 125 SATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRSILRRLAELQYARN 184
           +AT++LLER DVI+VASVS IYG+G  + Y  M   +  G  IDQR ++  L  LQY R 
Sbjct: 220 AATRSLLERDDVIIVASVSCIYGIGSVETYSAMTFDIKVGERIDQRGLIADLVALQYKRI 279

Query: 185 DQAFQRSTFRVRGEVIDVFPAESDDLALRIELFDQEVERLSLFDPLTGQVQHEVPRFTIY 244
              F R TFRVRG+ +++FPA  +D A R+ LF  EVE ++ FDPLTGQ   ++    +Y
Sbjct: 280 QSDFARGTFRVRGDSVEIFPAHYEDRAWRVSLFGDEVESIAEFDPLTGQKSGDMKSVRVY 339

Query: 245 PKTHYVTPRERIVQAMEEIKVELADRRKVLLANNKLLEEQRISQRTQFDLEMMNELGYCS 304
             +HYVTPR  ++QA+  IK EL  R   L    +LLE QR+ QRT++DLEMM   G C+
Sbjct: 340 AASHYVTPRPTLIQAISGIKAELKMRLDELYKMGRLLEAQRLEQRTRYDLEMMEATGSCA 399

Query: 305 GIENYSRYLSGRGPGEPPPTLFDYLPADGLLIVDESHVTIPQIGGMYKGDRSRKETLVEY 364
           GIENYSR+L+GR PGEPPPTLF+Y+P + L+ +DESHVT+PQIG MY+GD  RK TL EY
Sbjct: 400 GIENYSRWLTGRKPGEPPPTLFEYVPDNALVFIDESHVTVPQIGAMYRGDFRRKATLAEY 459

Query: 365 GFRLPSALDNRPMRFEEFEALAPQSIYVSATPGKYELEKSGDDVVDQVVRPTGLLDPIIE 424
           GFRLPS +DNRP+RFEE+EA+ PQ+++VSATPG +E+ ++G   V+QV+RPTGL+DP +E
Sbjct: 460 GFRLPSCMDNRPLRFEEWEAMRPQTVHVSATPGSWEMNQTGGVFVEQVIRPTGLIDPPVE 519

Query: 425 VRPVTTQVDDLLSEIRKRVAINERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHSDIDTVE 484
           VRP  TQVDDLL E+R   A   R LVT LTKRMAEDLTEYL E+G +VRY+HSDIDT+E
Sbjct: 520 VRPARTQVDDLLGEVRAVAAKGYRTLVTVLTKRMAEDLTEYLHENGIRVRYMHSDIDTIE 579

Query: 485 RVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAAR 544
           R+EIIRDLRLG FDVL+GINLLREGLD+PE  LVAILDADKEGFLRSE SL+QTIGRAAR
Sbjct: 580 RIEIIRDLRLGAFDVLIGINLLREGLDIPECGLVAILDADKEGFLRSETSLVQTIGRAAR 639

Query: 545 NLNGKAILYGDKITNSMARAIEETERRRAKQEAYNLENGITPMGLNKKISDILQLGQPKT 604
           N++G+ +LY D IT SM RA+ ET RRR KQ AYN E+GITP  + K I DIL     + 
Sbjct: 640 NVDGRVVLYADHITGSMERAMAETSRRREKQVAYNTEHGITPESVKKAIGDILNSVYERD 699

Query: 605 KKNKDKRDAEAAQTFKSLTPKALEQRIKELESKMYAHAQNLEFEEAANTRDELHALREQF 664
               D   AE    F       L+  + +LE +M A A +L+FE AA  RDE+  L    
Sbjct: 700 HVQVDAGLAEEGAAF----GHNLKAVMADLEKRMRAAAADLDFETAARLRDEIRRLEATE 755

Query: 665 IAIS 668
           +A+S
Sbjct: 756 LAVS 759