Pairwise Alignments

Query, 668 a.a., excinuclease ABC subunit B from Rahnella sp. WP5

Subject, 671 a.a., excinuclease ABC subunit B from Pseudomonas simiae WCS417

 Score =  957 bits (2475), Expect = 0.0
 Identities = 481/670 (71%), Positives = 571/670 (85%), Gaps = 7/670 (1%)

Query: 4   EFKLHSEFKPSGDQPEAIRRLEEGLENGLAHQTLLGVTGSGKTFTVANVIADLNRPTMVL 63
           +F+L + F+P+GDQPEAIR++ EG+E GLAHQTLLGVTGSGKTF++ANVIA +NRPT+VL
Sbjct: 3   DFQLVTRFEPAGDQPEAIRQMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQINRPTLVL 62

Query: 64  APNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMR 123
           APNKTLAAQLYGE K FFP NAVEYFVSYYDYYQPEAYVPSSDTFIEKDAS+N+HIEQMR
Sbjct: 63  APNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQMR 122

Query: 124 LSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRSILRRLAELQYAR 183
           LSATKALLER+D I+V +VS IYGLG P+ YLKM+LH+ +G  +DQR +LRRL  LQY R
Sbjct: 123 LSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRELLRRLTSLQYTR 182

Query: 184 NDQAFQRSTFRVRGEVIDVFPAESDDLALRIELFDQEVERLSLFDPLTGQVQHEVPRFTI 243
           ND  F R+TFRVRG+VID++PAESD  A+RIELFD EVE LS FDPLTG+V  ++PRFT 
Sbjct: 183 NDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESLSAFDPLTGEVIRKLPRFTF 242

Query: 244 YPKTHYVTPRERIVQAMEEIKVELADRRKVLLANNKLLEEQRISQRTQFDLEMMNELGYC 303
           YPK+HYVTPRE ++ A+E IKVELA+R + L +NNKL+E QR+ QRT+FDLEM+ ELGYC
Sbjct: 243 YPKSHYVTPRETLMGAIEGIKVELAERLEYLRSNNKLVEAQRLEQRTRFDLEMILELGYC 302

Query: 304 SGIENYSRYLSGRGPGEPPPTLFDYLPADGLLIVDESHVTIPQIGGMYKGDRSRKETLVE 363
           +GIENYSRYLSGR  G PPPTL+DYLP D LL++DESHV++PQ+G MYKGDRSRKETLVE
Sbjct: 303 NGIENYSRYLSGRESGAPPPTLYDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETLVE 362

Query: 364 YGFRLPSALDNRPMRFEEFEALAPQSIYVSATPGKYELEKSGDDVVDQVVRPTGLLDPII 423
           YGFRLPSALDNRPMRF+E+EA++PQ+I+VSATPG YE E +G  V++Q+VRPTGL+DP I
Sbjct: 363 YGFRLPSALDNRPMRFDEWEAISPQTIFVSATPGNYEAEHAG-RVIEQLVRPTGLVDPEI 421

Query: 424 EVRPVTTQVDDLLSEIRKRVAINERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHSDIDTV 483
           E+RP  TQVDDLLSEI KRVA+ ERVLVTTLTKRM+EDLT+YL +HG +VRYLHSDIDTV
Sbjct: 422 EIRPALTQVDDLLSEITKRVALEERVLVTTLTKRMSEDLTDYLADHGVRVRYLHSDIDTV 481

Query: 484 ERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAA 543
           ERVEIIRDLRLG FDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAA
Sbjct: 482 ERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAA 541

Query: 544 RNLNGKAILYGDKITNSMARAIEETERRRAKQEAYNLENGITPMGLNKKISDILQ-LGQP 602
           RNLNG+AILY D+IT SM RAI ET+RRR KQ A+NLENGITP G+ K ++DI++    P
Sbjct: 542 RNLNGRAILYADRITGSMERAIGETQRRRDKQIAFNLENGITPKGVFKDVADIMEGATVP 601

Query: 603 KTKKNKDKRDAEAAQTFKSL-----TPKALEQRIKELESKMYAHAQNLEFEEAANTRDEL 657
            ++  K K  A+AA+          +P  + +RI++LE KMY  A++LEFE AA TRDE+
Sbjct: 602 GSRSKKRKGMAKAAEESAKYENELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQTRDEI 661

Query: 658 HALREQFIAI 667
             LRE+ +A+
Sbjct: 662 GKLRERLLAV 671