Pairwise Alignments

Query, 668 a.a., excinuclease ABC subunit B from Rahnella sp. WP5

Subject, 671 a.a., excinuclease UvrABC protein B from Pseudomonas putida KT2440

 Score =  933 bits (2412), Expect = 0.0
 Identities = 474/669 (70%), Positives = 560/669 (83%), Gaps = 7/669 (1%)

Query: 4   EFKLHSEFKPSGDQPEAIRRLEEGLENGLAHQTLLGVTGSGKTFTVANVIADLNRPTMVL 63
           EF+L + F+P+GDQPEAIR+L EG+E GL+HQTLLGVTGSGKTF++ANVI  + RPT+VL
Sbjct: 3   EFQLVTRFQPAGDQPEAIRQLVEGIEAGLSHQTLLGVTGSGKTFSIANVIQQVQRPTLVL 62

Query: 64  APNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMR 123
           APNKTLAAQLYGE K FFP NAVEYFVSYYDYYQPEAYVPSSDTFIEKDAS+N+HIEQMR
Sbjct: 63  APNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQMR 122

Query: 124 LSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRSILRRLAELQYAR 183
           LSATKALLERRD I+V +VS IYGLG P+ YLKM+LH+ +G  +DQR++LRRLA+LQY R
Sbjct: 123 LSATKALLERRDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQYTR 182

Query: 184 NDQAFQRSTFRVRGEVIDVFPAESDDLALRIELFDQEVERLSLFDPLTGQVQHEVPRFTI 243
           N+  F R+TFRVRG+VID+FPAESD  A+RIELFD EVE ++ FDPLTG+V  ++PRFT 
Sbjct: 183 NEMDFARATFRVRGDVIDIFPAESDLEAIRIELFDDEVENIAAFDPLTGEVFRKLPRFTF 242

Query: 244 YPKTHYVTPRERIVQAMEEIKVELADRRKVLLANNKLLEEQRISQRTQFDLEMMNELGYC 303
           YPK+HYVTPRE +++A+E IK EL +R + L   NKL+E QR+ QRT+FDLEM+ ELGYC
Sbjct: 243 YPKSHYVTPRETLLEAVEGIKEELKERLEYLHKANKLVEAQRLEQRTRFDLEMILELGYC 302

Query: 304 SGIENYSRYLSGRGPGEPPPTLFDYLPADGLLIVDESHVTIPQIGGMYKGDRSRKETLVE 363
           +GIENYSRYLSGR  G PPPTL+DYLP D LL++DESHV++PQ+G MYKGDRSRKETLVE
Sbjct: 303 NGIENYSRYLSGRPAGAPPPTLYDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETLVE 362

Query: 364 YGFRLPSALDNRPMRFEEFEALAPQSIYVSATPGKYELEKSGDDVVDQVVRPTGLLDPII 423
           YGFR+PSALDNRPMRF+E+E ++PQ+I+VSATPG YE E +G  VV+QVVRPTGL+DP +
Sbjct: 363 YGFRMPSALDNRPMRFDEWEDVSPQTIFVSATPGPYEAEHAG-RVVEQVVRPTGLVDPQV 421

Query: 424 EVRPVTTQVDDLLSEIRKRVAINERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHSDIDTV 483
           EVRP  TQVDDLLSEIRKRVA  ERVL TTLTKRMAEDL++YL +H  +VRYLHSDIDTV
Sbjct: 422 EVRPALTQVDDLLSEIRKRVAAGERVLATTLTKRMAEDLSDYLADHDVRVRYLHSDIDTV 481

Query: 484 ERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAA 543
           ERVEIIRDLRLG FDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAA
Sbjct: 482 ERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAA 541

Query: 544 RNLNGKAILYGDKITNSMARAIEETERRRAKQEAYNLENGITPMGLNKKISDILQ-LGQP 602
           RNLNG+AILY D +T SM RAI+ETERRR KQ A+N  NGI P G+ K I+DI++    P
Sbjct: 542 RNLNGRAILYADNVTGSMQRAIDETERRREKQIAFNEANGIVPKGVVKDITDIMEGATVP 601

Query: 603 KTKKNKDKRDAEAAQ-----TFKSLTPKALEQRIKELESKMYAHAQNLEFEEAANTRDEL 657
             +  K K  A+AA+       +  TP  + +RIK+LE KM   A++LEFE AA  RDE+
Sbjct: 602 GARSKKRKGMAKAAEESARYEAELRTPGEITKRIKQLEEKMMQFARDLEFEAAAQLRDEI 661

Query: 658 HALREQFIA 666
             LRE+ I+
Sbjct: 662 AQLRERLIS 670