Pairwise Alignments

Query, 668 a.a., excinuclease ABC subunit B from Rahnella sp. WP5

Subject, 706 a.a., Excinuclease ABC subunit B from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  861 bits (2225), Expect = 0.0
 Identities = 434/662 (65%), Positives = 532/662 (80%), Gaps = 4/662 (0%)

Query: 5   FKLHSEFKPSGDQPEAIRRLEEGLENGLAHQTLLGVTGSGKTFTVANVIADLNRPTMVLA 64
           F+L   + P+GDQPEAIR+L EG+ +G   QTLLGVTGSGKTFT+ANVIA L RP +V A
Sbjct: 35  FELFLPYPPAGDQPEAIRQLVEGVNDGEVFQTLLGVTGSGKTFTMANVIARLGRPAIVFA 94

Query: 65  PNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRL 124
           PNKTLAAQLY E +EFFP+NAVEYFVSYYDYYQPEAYVP  D FIEKD+++NEHIEQMRL
Sbjct: 95  PNKTLAAQLYSEFREFFPKNAVEYFVSYYDYYQPEAYVPQRDLFIEKDSAINEHIEQMRL 154

Query: 125 SATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRSILRRLAELQYARN 184
           S TK++LERRDV++VA+VSAIYG+G P+ Y +M++ L  G  I QR ++ +L  +QYARN
Sbjct: 155 SCTKSILERRDVVIVATVSAIYGIGKPESYHQMVMTLRTGDKIGQRDLIAQLVRMQYARN 214

Query: 185 DQAFQRSTFRVRGEVIDVFPAESDDLALRIELFDQEVERLSLFDPLTGQVQHEVPRFTIY 244
           +Q F R  FRVRG+ IDVFPAE  ++A+RIELFD EVE L LFDPLTG+V+ ++PRFT+Y
Sbjct: 215 EQDFSRGKFRVRGDTIDVFPAEHSEMAIRIELFDDEVETLQLFDPLTGKVRQKIPRFTVY 274

Query: 245 PKTHYVTPRERIVQAMEEIKVELADRRKVLLANNKLLEEQRISQRTQFDLEMMNELGYCS 304
           P +HYVTPRE+++ A+E IK+ELADR K L+   KL+E QR+ QRT+FD+EM++E+G+C 
Sbjct: 275 PSSHYVTPREQVLHAVEAIKLELADRLKQLVGEGKLVEAQRLEQRTRFDVEMLSEVGHCK 334

Query: 305 GIENYSRYLSGRGPGEPPPTLFDYLPADGLLIVDESHVTIPQIGGMYKGDRSRKETLVEY 364
           GIENYSR+L+G  PGEPP TL DYLP D ++ +DESHV + Q GGMY GDR+RK TLVEY
Sbjct: 335 GIENYSRHLAGSAPGEPPSTLTDYLPKDAVMFLDESHVLMGQFGGMYNGDRARKTTLVEY 394

Query: 365 GFRLPSALDNRPMRFEEFEALAPQSIYVSATPGKYELEKSGDDVVDQVVRPTGLLDPIIE 424
           GFRLPSALDNRP++ EEFE    Q ++VSATP  YE   +G  VV+Q+VRPTGL+DP +E
Sbjct: 395 GFRLPSALDNRPLKLEEFEQRMRQVVFVSATPADYEKTHAG-QVVEQLVRPTGLVDPELE 453

Query: 425 VRPVTTQVDDLLSEIRKRVAINERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHSDIDTVE 484
           VRP T QVDD+L EIR RV  NERVL+TTLTKRMAE LT+YL E+G KVRYLHSD+DTVE
Sbjct: 454 VRPATHQVDDVLQEIRIRVEKNERVLITTLTKRMAEQLTDYLTENGVKVRYLHSDVDTVE 513

Query: 485 RVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAAR 544
           RVEIIRDLRLG FDVLVGINLLREGLD+PEVSLVAILDADKEGFLRSERSLIQTIGRAAR
Sbjct: 514 RVEIIRDLRLGAFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAAR 573

Query: 545 NLNGKAILYGDKITNSMARAIEETERRRAKQEAYNLENGITPMGLNKKISDILQ-LGQPK 603
           NL GKAILY D+IT+SM RA++ET+RRR KQ A+NL  GI P  +NK+I D++  +   K
Sbjct: 574 NLGGKAILYADRITDSMKRAMDETQRRRDKQIAHNLAMGIEPRSINKRIKDLIDGVYSEK 633

Query: 604 TKKNKDKRDAEAAQ--TFKSLTPKALEQRIKELESKMYAHAQNLEFEEAANTRDELHALR 661
             +  D+  AE+AQ  + + ++ K + + IK LE  M  HA+NLEFE+AA  RD+L  L+
Sbjct: 634 AGREADRLAAESAQRASVEDMSEKDVAREIKRLEKLMLEHARNLEFEKAAGVRDQLAHLK 693

Query: 662 EQ 663
            Q
Sbjct: 694 AQ 695