Pairwise Alignments

Query, 668 a.a., excinuclease ABC subunit B from Rahnella sp. WP5

Subject, 674 a.a., excinuclease ABC subunit B from Erwinia tracheiphila SCR3

 Score = 1135 bits (2936), Expect = 0.0
 Identities = 574/674 (85%), Positives = 616/674 (91%), Gaps = 6/674 (0%)

Query: 1   MSKEFKLHSEFKPSGDQPEAIRRLEEGLENGLAHQTLLGVTGSGKTFTVANVIADLNRPT 60
           MSK FKL S+F PSGDQPEAIR LEEGLENGLAHQTLLGVTGSGKTFTVANVIADLNRPT
Sbjct: 1   MSKVFKLKSDFNPSGDQPEAIRLLEEGLENGLAHQTLLGVTGSGKTFTVANVIADLNRPT 60

Query: 61  MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE 120
           MVLAPNKTLAAQLYGEMKEFFP+NAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
Sbjct: 61  MVLAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE 120

Query: 121 QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRSILRRLAELQ 180
           QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLT+GM+IDQR+ILRRLAELQ
Sbjct: 121 QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTRGMVIDQRAILRRLAELQ 180

Query: 181 YARNDQAFQRSTFRVRGEVIDVFPAESDDLALRIELFDQEVERLSLFDPLTGQVQHEVPR 240
           Y RNDQAFQR TFRVRGEVID+FPAESDD ALR+ELFD+EVERLS+FDPLTGQ+   +PR
Sbjct: 181 YTRNDQAFQRGTFRVRGEVIDIFPAESDDYALRVELFDEEVERLSIFDPLTGQIGSVIPR 240

Query: 241 FTIYPKTHYVTPRERIVQAMEEIKVELADRRKVLLANNKLLEEQRISQRTQFDLEMMNEL 300
           +TIYPKTHYVTPRERI+QAMEEIK+EL DRRK LL NNKLLEEQRISQRTQFDLEMMNEL
Sbjct: 241 YTIYPKTHYVTPRERILQAMEEIKLELVDRRKTLLDNNKLLEEQRISQRTQFDLEMMNEL 300

Query: 301 GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLIVDESHVTIPQIGGMYKGDRSRKET 360
           GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLL++DESHVTIPQIGGMY+GDR+RKET
Sbjct: 301 GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKET 360

Query: 361 LVEYGFRLPSALDNRPMRFEEFEALAPQSIYVSATPGKYELEKSGDDVVDQVVRPTGLLD 420
           LVEYGFRLPSALDNRPM+FEEFEALAPQ+IYVSATPG YELEKSG DV+DQVVRPTGLLD
Sbjct: 361 LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGNYELEKSGGDVIDQVVRPTGLLD 420

Query: 421 PIIEVRPVTTQVDDLLSEIRKRVAINERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHSDI 480
           P++EVRPV TQVDDLLSEIRKRV INERVLVT LTKRMAEDLTEYLEEHGE+VRYLHSDI
Sbjct: 421 PLVEVRPVATQVDDLLSEIRKRVVINERVLVTVLTKRMAEDLTEYLEEHGERVRYLHSDI 480

Query: 481 DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG 540
           DTVERVEIIRDLRLG+F+VLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
Sbjct: 481 DTVERVEIIRDLRLGKFNVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG 540

Query: 541 RAARNLNGKAILYGDKITNSMARAIEETERRRAKQEAYNLENGITPMGLNKKISDILQLG 600
           RAARN+NGKAILYGD+IT SM +AI ETERRR KQ  YN E GI P GLNKKI+DIL+LG
Sbjct: 541 RAARNVNGKAILYGDRITPSMTKAIGETERRREKQTLYNQEKGIVPQGLNKKIADILELG 600

Query: 601 Q------PKTKKNKDKRDAEAAQTFKSLTPKALEQRIKELESKMYAHAQNLEFEEAANTR 654
           Q       KT+    +   E       ++PK L+++I++LE+KM  HA+NLEFEEAA  R
Sbjct: 601 QGIGKSKNKTRGKASRSIVEEDAAVMDMSPKGLQKQIQQLEAKMQEHARNLEFEEAAQVR 660

Query: 655 DELHALREQFIAIS 668
           D LH LRE FIA S
Sbjct: 661 DRLHQLRELFIAAS 674