Pairwise Alignments

Query, 668 a.a., excinuclease ABC subunit B from Rahnella sp. WP5

Subject, 670 a.a., excinuclease ABC subunit B from Dickeya dadantii 3937

 Score = 1156 bits (2991), Expect = 0.0
 Identities = 580/670 (86%), Positives = 629/670 (93%), Gaps = 2/670 (0%)

Query: 1   MSKEFKLHSEFKPSGDQPEAIRRLEEGLENGLAHQTLLGVTGSGKTFTVANVIADLNRPT 60
           MSK FKLHS+FKP+GDQPEAIRRLEEGLE+GLAHQTLLGVTGSGKTFT+ANVIADLNRPT
Sbjct: 1   MSKAFKLHSDFKPAGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLNRPT 60

Query: 61  MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE 120
           MVLAPNKTLAAQLYGEMK FFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
Sbjct: 61  MVLAPNKTLAAQLYGEMKAFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE 120

Query: 121 QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRSILRRLAELQ 180
           QMRLSATKALLERRDV+VVASVSAIYGLGDPDLYLKMMLHLT+GM+IDQR+ILRRLAELQ
Sbjct: 121 QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTQGMLIDQRAILRRLAELQ 180

Query: 181 YARNDQAFQRSTFRVRGEVIDVFPAESDDLALRIELFDQEVERLSLFDPLTGQVQHEVPR 240
           YARNDQAF R TFRVRGE+ID+FPAES+D+ALR+ELFD+EVERLSLFDPLTG +   VPR
Sbjct: 181 YARNDQAFSRGTFRVRGEIIDIFPAESEDIALRVELFDEEVERLSLFDPLTGHIVQTVPR 240

Query: 241 FTIYPKTHYVTPRERIVQAMEEIKVELADRRKVLLANNKLLEEQRISQRTQFDLEMMNEL 300
           +TIYPKTHYVTPRERI+QAMEEIKVELA+RR+VLLA NKLLEEQR++QRT FDLEMMNEL
Sbjct: 241 YTIYPKTHYVTPRERILQAMEEIKVELAERRQVLLAGNKLLEEQRLAQRTTFDLEMMNEL 300

Query: 301 GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLIVDESHVTIPQIGGMYKGDRSRKET 360
           GYCSGIENYSR+LSGRGPGEPPPTLFDYLPADGLL++DESHVTIPQ+GGMY+GDR+RKET
Sbjct: 301 GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQLGGMYRGDRARKET 360

Query: 361 LVEYGFRLPSALDNRPMRFEEFEALAPQSIYVSATPGKYELEKSGDDVVDQVVRPTGLLD 420
           LVEYGFRLPSALDNRPM+FEEFEALAPQ+IYVSATPG YELEKSG +V+DQVVRPTGLLD
Sbjct: 361 LVEYGFRLPSALDNRPMKFEEFEALAPQAIYVSATPGNYELEKSGGEVIDQVVRPTGLLD 420

Query: 421 PIIEVRPVTTQVDDLLSEIRKRVAINERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHSDI 480
           P +EVRPVTTQVDDLLSEIRKR  INERVLVTTLTKRMAEDLTEYLEEHGE+VRYLHSDI
Sbjct: 421 PELEVRPVTTQVDDLLSEIRKRAVINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI 480

Query: 481 DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG 540
           DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
Sbjct: 481 DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG 540

Query: 541 RAARNLNGKAILYGDKITNSMARAIEETERRRAKQEAYNLENGITPMGLNKKISDILQLG 600
           RAARNLNGKAILY DKIT SM RA+ ET+RRR KQ+AYN ++GI P GLNKKI DILQ+G
Sbjct: 541 RAARNLNGKAILYADKITPSMERAMNETQRRREKQQAYNEQHGIVPQGLNKKIGDILQIG 600

Query: 601 QPKT--KKNKDKRDAEAAQTFKSLTPKALEQRIKELESKMYAHAQNLEFEEAANTRDELH 658
           Q      K + K+ AE A  ++ L+PKAL+Q+I+ELES+M AHAQNLEFEEAA  RDE+H
Sbjct: 601 QSANGRGKGRGKKAAEPAAHYQQLSPKALDQKIRELESQMLAHAQNLEFEEAARLRDEIH 660

Query: 659 ALREQFIAIS 668
           ALREQFIA S
Sbjct: 661 ALREQFIAAS 670