Pairwise Alignments

Query, 668 a.a., excinuclease ABC subunit B from Rahnella sp. WP5

Subject, 749 a.a., excinuclease ABC subunit B from Caulobacter crescentus NA1000 Δfur

 Score =  785 bits (2027), Expect = 0.0
 Identities = 401/664 (60%), Positives = 500/664 (75%), Gaps = 7/664 (1%)

Query: 3   KEFKLHSEFKPSGDQPEAIRRLEEGLENGLAHQTLLGVTGSGKTFTVANVIADLNRPTMV 62
           K+FKL S+++P+GDQP AI  L EGL+NG   Q LLGVTGSGKTFT+A VIA   RP ++
Sbjct: 45  KKFKLVSDYQPAGDQPTAIAELVEGLQNGDQDQVLLGVTGSGKTFTMAQVIARTQRPALI 104

Query: 63  LAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQM 122
           LAPNKTLAAQLY EMK FFPENAVEYFVSYYDYYQPEAYVP +DT+IEKD+S+NE I++M
Sbjct: 105 LAPNKTLAAQLYSEMKSFFPENAVEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQIDRM 164

Query: 123 RLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRSILRRLAELQYA 182
           R SAT+A+LER DVIVVASVS IYG+G  + Y  M   L  G  +D++ ++  L   QY 
Sbjct: 165 RHSATRAILERDDVIVVASVSCIYGIGSVETYTAMTFTLEVGQRVDEKQLIADLVAQQYK 224

Query: 183 RNDQAFQRSTFRVRGEVIDVFPAESDDLALRIELFDQEVERLSLFDPLTGQVQHEVPRFT 242
           RNDQAF+R TFR RG+ I++FPA  +D A R+ +F  EVE LS FD LTG+   ++    
Sbjct: 225 RNDQAFERGTFRRRGDTIEIFPAHYEDRAWRVTMFGDEVEALSEFDTLTGKKTADLEMIK 284

Query: 243 IYPKTHYVTPRERIVQAMEEIKVELADRRKVLLANNKLLEEQRISQRTQFDLEMMNELGY 302
           +Y  +H+VTPR  + QA+  I+ EL +R + L AN KLLE QR+ QRT FDLEM+   G 
Sbjct: 285 VYANSHHVTPRPTLRQAIIAIRQELKERLEWLTANGKLLEAQRLEQRTTFDLEMIETTGS 344

Query: 303 CSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLIVDESHVTIPQIGGMYKGDRSRKETLV 362
           C+GIENYSRYLSGR  GEPPPT F+Y+P + LL  DESH T+PQIG MYKGDR+RK TL 
Sbjct: 345 CAGIENYSRYLSGRKTGEPPPTFFEYIPDNALLFTDESHQTVPQIGAMYKGDRNRKWTLA 404

Query: 363 EYGFRLPSALDNRPMRFEEFEALAPQSIYVSATPGKYELEKSGDDVVDQVVRPTGLLDPI 422
           EYGFRLPSALDNRP++FEE++A+ PQS++VSATP  +ELE++G    +QV+RPTGL+DP 
Sbjct: 405 EYGFRLPSALDNRPLKFEEWDAMRPQSVHVSATPANWELERAGGVFAEQVIRPTGLIDPP 464

Query: 423 IEVRPVT----TQVDDLLSEIRKRVAINERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHS 478
           +EVRPV+    +QVDD++ EIR+ +    R LVT LTK+MAEDLTEYL E G +VRY+HS
Sbjct: 465 VEVRPVSKDGASQVDDVVDEIRQTIQKGYRTLVTVLTKKMAEDLTEYLTEQGIRVRYMHS 524

Query: 479 DIDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQT 538
           D+DT+ER+EIIRDLRLG FDVLVGINLLREGLD+PE  LVAILDADKEGFLRSE SLIQT
Sbjct: 525 DVDTIERIEIIRDLRLGHFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQT 584

Query: 539 IGRAARNLNGKAILYGDKITNSMARAIEETERRRAKQEAYNLENGITPMGLNKKISDILQ 598
           IGRAARN++GK ILY D++T SM RA+ ET RRR KQ AYNLE+GITP  + + I DI  
Sbjct: 585 IGRAARNVDGKVILYADRVTGSMERAMAETARRREKQHAYNLEHGITPESVKRDIKDI-- 642

Query: 599 LGQPKTKKNKDKRDAEAAQT-FKSLTPKALEQRIKELESKMYAHAQNLEFEEAANTRDEL 657
           L  P  + ++       ++T  +  +    +  +K+LE+KM   A NLEFE AA  RDE+
Sbjct: 643 LNSPYERGDRVLVPMGMSETDDRPFSGDNFKAALKDLEAKMREAAANLEFETAARLRDEI 702

Query: 658 HALR 661
             ++
Sbjct: 703 KRMK 706