Pairwise Alignments

Query, 588 a.a., succinate dehydrogenase flavoprotein subunit from Rahnella sp. WP5

Subject, 590 a.a., succinate dehydrogenase subunit A from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  837 bits (2161), Expect = 0.0
 Identities = 410/589 (69%), Positives = 475/589 (80%), Gaps = 3/589 (0%)

Query: 2   NLPVREFDAVVIGAGGAGMRAALQISQMGLSCALISKVFPTRSHTVSAQGGITVALGNTH 61
           N+    FDA++IG GGAGMRAALQ++Q G   A+++KVFPTRSHTVSAQGGIT A+ +  
Sbjct: 3   NINALSFDAIIIGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIASAD 62

Query: 62  -EDDWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLEDGRIYQRPFG 120
             DDW WHMYDTVKGSDYIGDQDAIEYMC  GPEA+ ELEHMGLPFSR E GRIYQRPFG
Sbjct: 63  PNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHMGLPFSRTEQGRIYQRPFG 122

Query: 121 GQSKNFG-GEQAARTAAAADRTGHALLHTLYQQNLKKGTTIFSEWYSLDLVKNQDGAIVG 179
           GQSK+FG G QAART AAADRTGHALLHTLYQ NLK GT   +E+Y++DLVKN DGA VG
Sbjct: 123 GQSKDFGKGGQAARTCAAADRTGHALLHTLYQANLKAGTVFLNEYYAVDLVKNNDGAFVG 182

Query: 180 CTAICIETGEVVYFKAKATVLATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMW 239
             AICIETGE  Y +A ATVLATGGAGRIY STTNA INTGDG+GMALRAGVPVQD+EMW
Sbjct: 183 IIAICIETGETSYIRANATVLATGGAGRIYSSTTNALINTGDGIGMALRAGVPVQDIEMW 242

Query: 240 QFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSIMIEIRE 299
           QFHPTGIAGAGVLVTEGCRGEGGYL+NK GERFMERYAPNAKDLAGRDVVARS++ EI  
Sbjct: 243 QFHPTGIAGAGVLVTEGCRGEGGYLINKHGERFMERYAPNAKDLAGRDVVARSMVKEIIA 302

Query: 300 GRGCEGPWGPHAKLKLDHLGKDVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGG 359
           G GC GP G H  LKLDHLG++VL SRLPGI+ELS+TFAHVDP   PIPV+PTCHYMMGG
Sbjct: 303 GNGC-GPDGDHVMLKLDHLGEEVLHSRLPGIMELSKTFAHVDPATAPIPVVPTCHYMMGG 361

Query: 360 IPTKVTGQALRVNAQGQDEVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGMHL 419
           + T + GQA+  +A G D++IPGLFAVGE+ACVSVHGANRLGGNSLLDLVVFGRAAG+HL
Sbjct: 362 VATNIHGQAITQDAAGVDQIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGIHL 421

Query: 420 QESITEQGESRDASQDDIDVSLERLNRWNNTRSGEDPVAIRKDLQSCMQNNFSVFREGDA 479
           ++++ E  +   AS+ DID +L RL   N   +GED   +RK+LQSCMQN F VFR G+ 
Sbjct: 422 EQALREGVDYARASESDIDAALARLAGLNERTTGEDVATLRKELQSCMQNYFGVFRTGEY 481

Query: 480 MAKGLEELKVIRERLKSARLDDTSSEFNTQRVECLELDNLMETAFSTAVSANYRTESRGA 539
           M KG+ +L  +R R+ + +++D S  FNT R+E LEL NL+E A +TA++A +R ESRGA
Sbjct: 482 MQKGIAQLADLRVRIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEHRKESRGA 541

Query: 540 HSRFDFPERDDANWLCHTLYQPETESMTRREVNMQPKLRAAFPPKARTY 588
           H+R DF +RDD NWLCHTLY P  +S+T+R VN  PK    F PK RTY
Sbjct: 542 HAREDFEDRDDENWLCHTLYFPGDKSVTKRAVNFSPKTVPTFEPKIRTY 590