Pairwise Alignments

Query, 588 a.a., succinate dehydrogenase flavoprotein subunit from Rahnella sp. WP5

Subject, 590 a.a., succinate dehydrogenase flavoprotein subunit from Pseudomonas putida KT2440

 Score =  844 bits (2181), Expect = 0.0
 Identities = 411/589 (69%), Positives = 484/589 (82%), Gaps = 3/589 (0%)

Query: 2   NLPVREFDAVVIGAGGAGMRAALQISQMGLSCALISKVFPTRSHTVSAQGGITVALGNTH 61
           ++P   FDA++IG GGAGMRAALQ++Q G   A+++KVFPTRSHTVSAQGGIT A+ +  
Sbjct: 3   SIPTISFDAIIIGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIASAD 62

Query: 62  -EDDWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLEDGRIYQRPFG 120
             DDW WHMYDTVKGSDYIGDQDAIEYMC+ GP A+ EL+HMGLPFSR E GRIYQRPFG
Sbjct: 63  PNDDWRWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGLPFSRTETGRIYQRPFG 122

Query: 121 GQSKNFG-GEQAARTAAAADRTGHALLHTLYQQNLKKGTTIFSEWYSLDLVKNQDGAIVG 179
           GQSK+FG G QAART AA+DRTGHALLHTLYQ NLK GTT  +E+Y++DLVKNQDGA VG
Sbjct: 123 GQSKDFGKGGQAARTCAASDRTGHALLHTLYQGNLKAGTTFLNEYYAVDLVKNQDGAFVG 182

Query: 180 CTAICIETGEVVYFKAKATVLATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMW 239
             AICIETGE +Y K+KATVLATGGAGRIY STTNA INTGDG+GMALRAGVPVQD+EMW
Sbjct: 183 VIAICIETGETLYIKSKATVLATGGAGRIYASTTNALINTGDGIGMALRAGVPVQDIEMW 242

Query: 240 QFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSIMIEIRE 299
           QFHPTGIAGAGVLVTEGCRGEGGYL+N  GERFMERYAPNAKDLAGRDVVARS++ EI  
Sbjct: 243 QFHPTGIAGAGVLVTEGCRGEGGYLINAHGERFMERYAPNAKDLAGRDVVARSMVKEIIA 302

Query: 300 GRGCEGPWGPHAKLKLDHLGKDVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGG 359
           G G  GP   H  LKLDHLG++VL SRLPGI ELS+TFAHVDPV  P+PV+PTCHYMMGG
Sbjct: 303 GNGV-GPNKDHVLLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVVPTCHYMMGG 361

Query: 360 IPTKVTGQALRVNAQGQDEVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGMHL 419
           + T + GQA+ ++A GQD +IPGLFAVGE+ACVSVHGANRLGGNSLLDLVVFGRAAG+HL
Sbjct: 362 VATNIHGQAITMDADGQDHIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLHL 421

Query: 420 QESITEQGESRDASQDDIDVSLERLNRWNNTRSGEDPVAIRKDLQSCMQNNFSVFREGDA 479
           +++++E  E RDAS  D+DV+L RLN+ N   SGED  +++++LQSCMQN F VFR G+ 
Sbjct: 422 EKALSEGVEYRDASDTDVDVALNRLNKLNERTSGEDVASLKRELQSCMQNYFGVFRTGEY 481

Query: 480 MAKGLEELKVIRERLKSARLDDTSSEFNTQRVECLELDNLMETAFSTAVSANYRTESRGA 539
           M KG+E+L  +R+R+ + +++D S  FNT R+E LEL NL+E A +TA++A  R ESRGA
Sbjct: 482 MQKGIEQLAGLRDRIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEARKESRGA 541

Query: 540 HSRFDFPERDDANWLCHTLYQPETESMTRREVNMQPKLRAAFPPKARTY 588
           H+R DF +RDD NWLCHTLY P  + + +R VN  PK   AF PK RTY
Sbjct: 542 HAREDFEDRDDENWLCHTLYYPGEKRVAKRGVNFAPKTVPAFEPKVRTY 590