Pairwise Alignments

Query, 590 a.a., SmdA family multidrug ABC transporter permease/ATP-binding protein from Rahnella sp. WP5

Subject, 608 a.a., ABC-type multidrug transport system, ATPase and permease components from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  265 bits (676), Expect = 5e-75
 Identities = 157/528 (29%), Positives = 275/528 (52%), Gaps = 6/528 (1%)

Query: 50  QMSYGVLFAW---LGLMLGTAVVVYLLRYVWRVLLFGASYQLAVELRQDFFRQLSRQHPA 106
           +M YG L A      +++ + ++  L RY  ++++        + LR+  F  +   H  
Sbjct: 76  KMEYGALGALQMVCAVIIASVILGNLFRYFSQLVMENLRIHTLLNLRKKVFDNVMNLHVG 135

Query: 107 FYLRHRTGDLIARATNDVDRVVFAAGEGVLTLVDSLVMGLAVLIVMATQISWELTLLSLV 166
           ++   R GD+I++ ++DV  V F+   G L ++    + L   I M   IS++LT+ SL+
Sbjct: 136 YFSNQRKGDIISKISSDVQVVQFSV-TGTLQVIFKEPLQLLAYIFMLFAISYKLTIFSLL 194

Query: 167 PMPVMAIIIKRYGDQLHSRFKTAQAAFSSLNDQAQESLTSIRMIKAFGLENHQSSQFADV 226
            +PV A +I +   +L ++   AQ  +  +     E+L+ I++IKAF        +F D 
Sbjct: 195 VIPVSAFVIAKIVKRLKAQASQAQHLYGVMISYLDEALSGIKIIKAFNATEMIKDKFHDE 254

Query: 227 AADTGAKNMRVARVDARFDPTIY-VSIGMANLLAIGGGSWMVVN-GHLTLGELTSFVMYL 284
                +   ++A+      P    + + M + + + GGS ++ N   L+  +  +++   
Sbjct: 255 NIKYSSLGKKMAKRQQLSSPVSETLGVAMVSGIVLYGGSLIINNQSELSASDFIAYIALF 314

Query: 285 GLMIWPMLALAWMFNIVERGSAAYSRIRSLLQEAPAVVDGTTPLPAGRATLEAHINDFHY 344
             ++ P  AL   F+ +  G AA  R+  L+ E PA+ D    +       +  I D  +
Sbjct: 315 SQVMRPAKALTNAFSSIHSGLAAGERVLDLIDEKPAISDQKDAIEITAFNDKIDIQDLSF 374

Query: 345 PENSHAALTTVTFSLQPGQMLGLCGPTGSGKSTLLSLLQRQFDVTDGDVCYHGLSLKEIQ 404
                  L  +  ++  G+M+ L GP+G GKST++ L+ R  +   G V   G  +  + 
Sbjct: 375 SYPGRPVLKDINLTIPKGKMVALVGPSGGGKSTMMDLIPRFIEPDSGQVLIDGTDIAHVT 434

Query: 405 LDDWRARLAVVSQTPFLFSDTVAQNIALGRPDATQEEIEEAARLASVHDDILRLPQGYET 464
           +D  R  + +V+Q   LF+DT+  NIA G P+AT EE+E AA++A+ H+ I++   GY++
Sbjct: 435 MDSLRNMMGMVNQESILFNDTIFNNIAFGTPNATAEEVEAAAKIANAHEFIVQSENGYQS 494

Query: 465 EVGERGVMLSGGQKQRISIARALLLKAEILILDDALSAVDGRTEHQILHNLRQWGSDRTV 524
            +G+RG+ LSGGQKQRI IARA+L    I++LD+A SA+D  +E  +   L +   +RT 
Sbjct: 495 NMGDRGLKLSGGQKQRICIARAVLKNPPIMLLDEATSALDTESEKLVQDALNKLMKNRTS 554

Query: 525 IISAHRLSALTEASEILVFSQGSISQRGNHDQLAAEAGWYRDMFRYQQ 572
           ++ AHRLS +  A  I+V  +G I ++GNH +L  + G Y  +   QQ
Sbjct: 555 LVIAHRLSTIQNADIIVVLEEGRIIEQGNHQELMTQEGLYSKLVNMQQ 602