Pairwise Alignments

Query, 590 a.a., SmdA family multidrug ABC transporter permease/ATP-binding protein from Rahnella sp. WP5

Subject, 596 a.a., ABC-type multidrug transport system, ATPase and permease components from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  321 bits (823), Expect = 5e-92
 Identities = 190/584 (32%), Positives = 314/584 (53%), Gaps = 22/584 (3%)

Query: 9   WYFRREWRRYLGAVALLVIIAVLQ----LLPPKLVGVIIDGVTSKQMSYGV--------- 55
           W   +   +Y G + L ++  ++     ++P +LV V ID V      Y +         
Sbjct: 5   WRLNKYLYKYKGYLLLGILFTIISNIFVMIPAQLVRVAIDYVVESFSFYQMFEQGASTAS 64

Query: 56  --------LFAWLGLMLGTAVVVYLLRYVWRVLLFGASYQLAVELRQDFFRQLSRQHPAF 107
                   +F +  L+L  A +     ++ R  +   S  +  +L+ + F    +   +F
Sbjct: 65  IRAAFLDFIFVFGVLILAMAFLRGFFLFLIRQTIIVMSRLIEYDLKNEIFAHYQQLPLSF 124

Query: 108 YLRHRTGDLIARATNDVDRVVFAAGEGVLTLVDSLVMGLAVLIVMATQISWELTLLSLVP 167
           Y ++ TGDL+AR T DV RV    G  ++  ++ LV+   V+  M T ++  LT+ SL+P
Sbjct: 125 YRKNSTGDLMARITEDVSRVRMYFGPALMYGINLLVLFPLVIGYMLT-VNVPLTIYSLLP 183

Query: 168 MPVMAIIIKRYGDQLHSRFKTAQAAFSSLNDQAQESLTSIRMIKAFGLENHQSSQFADVA 227
           +PV++I I    + ++ R +  Q + S L+   QES + IR++KAF  E   S +FA  +
Sbjct: 184 LPVLSISIYIVNNMINERSEKIQRSLSGLSTFVQESFSGIRVLKAFVREEDSSHKFATAS 243

Query: 228 ADTGAKNMRVARVDARFDPTIYVSIGMANLLAIGGGSWMVVNGHLTLGELTSFVMYLGLM 287
            D   K++ + +V A F P I   +G++ ++ +  G   V++G +  G +  F++Y+ ++
Sbjct: 244 EDYKEKSISLTKVQALFFPLIMGLVGISTIITVYVGGNQVIDGTIGYGVIAEFILYVNML 303

Query: 288 IWPMLALAWMFNIVERGSAAYSRIRSLLQEAPAVVDGTTPLPAGRATLEAHINDFHYPEN 347
            WP+ +L W+ +IV+R +A+ +RI   L E   +            T++     F YP++
Sbjct: 304 TWPVTSLGWITSIVQRAAASQTRINEFLDEKNTITSDEHLTEDIHGTIKFQDISFEYPDS 363

Query: 348 SHAALTTVTFSLQPGQMLGLCGPTGSGKSTLLSLLQRQFDVTDGDVCYHGLSLKEIQLDD 407
              AL  V+FS+  G+ L + G TGSGKST+ +LL R +D   G++      LK   L  
Sbjct: 364 GIKALKNVSFSIHAGESLAIIGTTGSGKSTIANLLMRMYDPVSGEIIVDDHPLKAYDLSH 423

Query: 408 WRARLAVVSQTPFLFSDTVAQNIALGRPDATQEEIEEAARLASVHDDILRLPQGYETEVG 467
            R  +  V Q  FLFSD+++ NI  G     QE +E+AA+ A V+ +I+  P G+ET +G
Sbjct: 424 LRKNIGYVPQDVFLFSDSISNNIGFGLDHIPQEVVEKAAKDADVYQNIMDFPNGFETRLG 483

Query: 468 ERGVMLSGGQKQRISIARALLLKAEILILDDALSAVDGRTEHQILHNLRQWGSDRTVIIS 527
           ERG+ LSGGQKQR+SIARA+     IL+LDD LSAVD +TE+ IL+ L+     RT II 
Sbjct: 484 ERGITLSGGQKQRVSIARAIAKDPSILLLDDCLSAVDTKTENVILNALKGIMEGRTSIII 543

Query: 528 AHRLSALTEASEILVFSQGSISQRGNHDQLAAEAGWYRDMFRYQ 571
           +HR+S+   A +I+V   G + + G+H+ L A  G Y +++  Q
Sbjct: 544 SHRVSSAKLADKIIVLDDGKLVEEGSHETLMASKGVYAELYEKQ 587