Pairwise Alignments

Query, 590 a.a., SmdA family multidrug ABC transporter permease/ATP-binding protein from Rahnella sp. WP5

Subject, 591 a.a., ABC-type multidrug transport system, ATPase and permease components from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  248 bits (633), Expect = 5e-70
 Identities = 170/571 (29%), Positives = 289/571 (50%), Gaps = 17/571 (2%)

Query: 9   WYFRREWR-RYLGAVALLVIIAVLQLLPPKLVGVIID---GVTSKQMSYGVLFAWLGLML 64
           + F R +R R+   + L V +A L    P  +   ID    +  ++    +++  +GL++
Sbjct: 23  YQFVRPYRGRFFFLIFLTVALAALAPTKPLFIQKAIDEHVALGDQEGLLRIIYLLVGLLI 82

Query: 65  GTAVVVYLLRYVWRVLLFGASYQLAV-ELRQDFFRQLSRQHPAFYLRHRTGDLIARATND 123
             AVV +   Y     L G   Q+ + ++R   +R L +    F+     G L+ R  +D
Sbjct: 83  LQAVVQFAHTY-----LSGWIGQVIIRDIRVKLYRHLLKMRLKFFDNTPIGRLVTRNISD 137

Query: 124 VDRVVFAAGEGVLTLVDSLVMGLAVLIVMATQISWELTLLSLVPMPVMAIIIKRYGDQLH 183
           ++ +     EG+  ++  L+    +L VM   + W+LTL+SL  +P++ I    + +++ 
Sbjct: 138 IESLSNVFSEGLAAIIGDLLQLFTILGVMFW-VDWKLTLVSLSTLPLLIISTYIFKEKVK 196

Query: 184 SRFKTAQAAFSSLNDQAQESLTSIRMIKAFGLENHQSSQFADVAADTGAKNMRVARVDAR 243
             F   + A S+LN   QE +T + +++ F  E+ +  +F  +  +    N++     A 
Sbjct: 197 VAFNEVRNAVSNLNSFLQEHITGMNIVQVFNREDSEYKKFDAINTEHKKANVKSVLYYAI 256

Query: 244 FDPTIYVSIGMANLLAIGGGSWMVVNGHLTLGELTSFVMYLGLMIWPMLALAWMFNIVER 303
           + P   +   +   L +  G+  V    L +G L SF+MYL L   P+  LA  FN ++ 
Sbjct: 257 YYPVAEIIQAVGIGLVVWYGATGVFGLDLKVGVLISFIMYLQLFFRPIRMLADRFNTLQM 316

Query: 304 GSAAYSRIRSLLQEAPAVVDGTTPLPA---GRATLEAHINDFHYPENSHAALTTVTFSLQ 360
           G  + SRI  LL+    + +     P    G   LE   N +    +    L  + F+++
Sbjct: 317 GVVSSSRIFKLLESDEHIANEGNYSPEKLKGNIKLE---NVWFAYNDEEWVLKDINFNVK 373

Query: 361 PGQMLGLCGPTGSGKSTLLSLLQRQFDVTDGDVCYHGLSLKEIQLDDWRARLAVVSQTPF 420
            G+ + L G TG+GKS++++L+ R +++  G +     ++++ +L   R  + VV Q  F
Sbjct: 374 HGETVALVGATGAGKSSIINLISRFYEINKGSIKIDDQNIRDFELGTLRKHIGVVLQDVF 433

Query: 421 LFSDTVAQNIALGRPDATQEEIEEAARLASVHDDILRLPQGYETEVGERGVMLSGGQKQR 480
           LFSDT+  NI LG PD T+E++ EAA L      I RLP G +  V ERG  LS GQ+Q 
Sbjct: 434 LFSDTIYFNITLGNPDITREQVMEAAELVGAKKFIERLPGGLDYNVMERGATLSVGQRQL 493

Query: 481 ISIARALLLKAEILILDDALSAVDGRTEHQILHNLRQWGSDRTVIISAHRLSALTEASEI 540
           IS  RA++   EI+ILD+A S+VD  TE  I + + +    RT I+ AHRLS + +A  I
Sbjct: 494 ISFVRAMVYNPEIIILDEATSSVDTETEELIQNAIEKMMKGRTSIVIAHRLSTIQKAHNI 553

Query: 541 LVFSQGSISQRGNHDQLAAEAGWYRDMFRYQ 571
           +V  +G I + G HD L  + G+Y  + + Q
Sbjct: 554 IVLHKGEIKEMGTHDTLLEKEGYYAQLHQMQ 584