Pairwise Alignments

Query, 590 a.a., SmdA family multidrug ABC transporter permease/ATP-binding protein from Rahnella sp. WP5

Subject, 590 a.a., putative multidrug ABC transporter ATPase from Escherichia coli BL21

 Score =  927 bits (2395), Expect = 0.0
 Identities = 459/585 (78%), Positives = 521/585 (89%)

Query: 1   MRLFAQLGWYFRREWRRYLGAVALLVIIAVLQLLPPKLVGVIIDGVTSKQMSYGVLFAWL 60
           MRLFAQL WYFRREWRRYLGAVALLVIIA+LQL+PPK+VG+++DGVT +  + G++  W+
Sbjct: 1   MRLFAQLSWYFRREWRRYLGAVALLVIIAMLQLVPPKVVGIVVDGVTEQHFTTGLILMWI 60

Query: 61  GLMLGTAVVVYLLRYVWRVLLFGASYQLAVELRQDFFRQLSRQHPAFYLRHRTGDLIARA 120
             M+  AVVVYLLRYVWRVLLFGASYQLAVELR+D++RQLSRQHP FYLRHRTGDL+ARA
Sbjct: 61  ATMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDYYRQLSRQHPEFYLRHRTGDLMARA 120

Query: 121 TNDVDRVVFAAGEGVLTLVDSLVMGLAVLIVMATQISWELTLLSLVPMPVMAIIIKRYGD 180
           TNDVDRVVFAAGEGVLTLVDSLVMG AVLI+M+TQISW+LTL +L+PMPVMAI+IKR GD
Sbjct: 121 TNDVDRVVFAAGEGVLTLVDSLVMGCAVLIMMSTQISWQLTLFALLPMPVMAIMIKRNGD 180

Query: 181 QLHSRFKTAQAAFSSLNDQAQESLTSIRMIKAFGLENHQSSQFADVAADTGAKNMRVARV 240
            LH RFK AQAAFSSLND+ QESLTSIRMIKAFGLE+ QS+ FA  A DTG KNMRVAR+
Sbjct: 181 ALHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARI 240

Query: 241 DARFDPTIYVSIGMANLLAIGGGSWMVVNGHLTLGELTSFVMYLGLMIWPMLALAWMFNI 300
           DARFDPTIY++IGMANLLAIGGGSWMVV G LTLG+LTSF+MYLGLMIWPMLALAWMFNI
Sbjct: 241 DARFDPTIYIAIGMANLLAIGGGSWMVVQGSLTLGQLTSFMMYLGLMIWPMLALAWMFNI 300

Query: 301 VERGSAAYSRIRSLLQEAPAVVDGTTPLPAGRATLEAHINDFHYPENSHAALTTVTFSLQ 360
           VERGSAAYSRIR++L EAP V DG+ P+P GR  L+ +I+ F YP+  H AL  V F+L+
Sbjct: 301 VERGSAAYSRIRAMLAEAPVVNDGSEPVPEGRGELDVNIHQFTYPQTDHPALENVNFALK 360

Query: 361 PGQMLGLCGPTGSGKSTLLSLLQRQFDVTDGDVCYHGLSLKEIQLDDWRARLAVVSQTPF 420
           PGQMLG+CGPTGSGKSTLLSL+QR FDV++GD+ +H + L ++QLD WR+RLAVVSQTPF
Sbjct: 361 PGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPF 420

Query: 421 LFSDTVAQNIALGRPDATQEEIEEAARLASVHDDILRLPQGYETEVGERGVMLSGGQKQR 480
           LFSDTVA NIALG P+ATQ+EIE  ARLASVHDDILRLPQGY+TEVGERGVMLSGGQKQR
Sbjct: 421 LFSDTVANNIALGCPNATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQR 480

Query: 481 ISIARALLLKAEILILDDALSAVDGRTEHQILHNLRQWGSDRTVIISAHRLSALTEASEI 540
           ISIARALL+ AEILILDDALSAVDGRTEHQILHNLRQWG  RTVIISAHRLSALTEASEI
Sbjct: 481 ISIARALLVNAEILILDDALSAVDGRTEHQILHNLRQWGQGRTVIISAHRLSALTEASEI 540

Query: 541 LVFSQGSISQRGNHDQLAAEAGWYRDMFRYQQLEAALDDVSQEKE 585
           +V   G I+QRGNHD+LA ++GWYRDM+RYQQLEAALDD  + +E
Sbjct: 541 IVMQHGHIAQRGNHDELAQQSGWYRDMYRYQQLEAALDDAPEIRE 585