Pairwise Alignments

Query, 304 a.a., recombination-associated protein RdgC from Rahnella sp. WP5

Subject, 303 a.a., nucleoid-associated ssDNA and dsDNA binding protein; competitive inhibitor of RecA function from Escherichia coli BL21

 Score =  486 bits (1250), Expect = e-142
 Identities = 246/304 (80%), Positives = 269/304 (88%), Gaps = 1/304 (0%)

Query: 1   MLWFKNLLVYRLSREVSLSADEMEKQLSAFTFTPCGSQDMSKTGWVSPMGSHGGDALTHV 60
           MLWFKNL+VYRLSRE+SL A+EMEKQL++  FTPCGSQDM+K GWV PMGSH  DALTHV
Sbjct: 1   MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMGWVPPMGSHS-DALTHV 59

Query: 61  NGGQILICARKEEKILPSPVIKQELQAKIEQLEGEQHRKLKKTEKDSLKDEVLHSLMPRA 120
             GQI+ICARKEEKILPSPVIKQ L+AKI +LE EQ RKLKKTEKDSLKDEVLHSL+PRA
Sbjct: 60  ANGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRA 119

Query: 121 FSRFSQTFMWIDTVNGLIMVDAASAKKAEDMLALLRKSLGSLPVVPLTMESPIELTLTEW 180
           FSRFSQT MWIDTVNGLIMVD ASAKKAED LALLRKSLGSLPVVPL+ME+PIELTLTEW
Sbjct: 120 FSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLSMENPIELTLTEW 179

Query: 181 VRSGDTPAGFTLQDEAELKAILEEGGVIRCKKQVLVSDEIATHIENGKLVTKLAVDWQER 240
           VRSG    GF L DEAELK++LE+GGVIR KKQ L S+EI  HIE GK+VTKLA+DWQ+R
Sbjct: 180 VRSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGKVVTKLALDWQQR 239

Query: 241 IAVVLADDGSIKRLKFSDIIRDQNEDIDREDFAGRFDADFVLMTGELAALIQNLIEALGG 300
           I  V+ DDGS+KRLKF D +RDQNEDIDREDFA RFDADF+LMTGELAALIQNLIE LGG
Sbjct: 240 IQFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLGG 299

Query: 301 EAQR 304
           EAQR
Sbjct: 300 EAQR 303