Pairwise Alignments

Query, 559 a.a., DNA repair protein RecN from Rahnella sp. WP5

Subject, 557 a.a., factor used in recombination and DNA repair from Pseudomonas putida KT2440

 Score =  459 bits (1182), Expect = e-133
 Identities = 252/555 (45%), Positives = 352/555 (63%), Gaps = 3/555 (0%)

Query: 7   MLAQLTISNFAIVRELEIDFHAGMTAITGETGAGKSIAIDALGLCLGNRADGSMVRLGAS 66
           ML  L+I N+AIV  L+++   GM+ ITGETGAGKSI +DALGL LG+RAD  +VR G  
Sbjct: 1   MLVHLSIHNYAIVEHLDLEIARGMSVITGETGAGKSIMLDALGLALGDRADSGVVRPGTD 60

Query: 67  RADICARFTLADTPSAKHWLAENQLD-EGLDCLLRRTISNDGRSRGFINGTPVPLSQLRE 125
           +ADI A F L D P A  WLAE  LD EGL C+LRR I+ +GRSRG+INGTP PL  L+ 
Sbjct: 61  KADILATFDLVDIPEAHTWLAERDLDNEGL-CILRRVITAEGRSRGYINGTPCPLGDLKA 119

Query: 126 LGQHLIQIHGQHAHQLLLKPEHQKALLDAYSDQPLLLSEMRKAYQNWHQSCRQLAQYQQQ 185
           LG+ LI IH QH HQ LLK +  + LLD Y+    L  +++ A + W+Q+  +L +    
Sbjct: 120 LGELLIDIHSQHEHQSLLKTDTHRRLLDEYAGAVDLARQVQLAAKRWNQTRLELERLSNS 179

Query: 186 MSERESRRQLLQYQLKELNEFAPQAGEYEQIDEEYKRLANSGQLLSLSQNALYLLADGEE 245
             E+ +R QLL YQL+EL+       E EQ+++E+K L ++  L  + +  +   ++ + 
Sbjct: 180 GDEQRARHQLLSYQLEELDNLGLGEHELEQLEQEHKNLTSAEALFGICRQVIDQCSESDS 239

Query: 246 QNIVSLLYSARNQLTELAELDSKMNDLIVMLDDASIQVSEASDELRHYSERLDMDPNRLF 305
            N++S L S+ N+L         +++   ++  A IQV EA  EL  + +  D DP RL 
Sbjct: 240 GNVLSALTSSLNRLGAATNSPKALSEAANLIASAQIQVEEAVGELNRFLDNFDADPIRLQ 299

Query: 306 ELEQRLSRQMNLARKHHVSAEDLPELHRQLLEEQQELDDQETNQAELSEAVQRHYQQAVA 365
            LE+RL     LARKH V   +LP L +QL+EE + L+  + +   L E +  + Q    
Sbjct: 300 ALEERLDTIYTLARKHRVHPTELPHLQQQLMEELEGLNASDESIERLGEELAAYAQHYKE 359

Query: 366 VAEQLHEKRQYFADELTHLITQSMQALSMPHGKFKIQVQF-EPEHLNMEGADRLEFQVTT 424
            A +L   RQ  A +L   + Q +Q L MP G+F I++   E   L+  G +++E  V+ 
Sbjct: 360 KARELSGLRQQAAQQLAGAVEQEIQRLGMPGGRFCIELTANEGTELSPHGLEQIELLVSA 419

Query: 425 NPGQPLQALAKVASGGELSRIALAIQVITAQKMETPALIFDEVDVGISGPTAAIVGRLLR 484
           NPGQPL+ALAKVASGGELSRI+LAIQVITAQ    P L+FDEVDVGI GPTA IVG+LLR
Sbjct: 420 NPGQPLKALAKVASGGELSRISLAIQVITAQTSRIPTLVFDEVDVGIGGPTAEIVGQLLR 479

Query: 485 QLGESTQVMCVTHLPQVAGCGHQHYFVSKETDGEVTETQMNRLDKKARLQELARLLGGSE 544
           +LGE  QV+ VTHLPQVA  GH H FV K  + + T T +  L K+ R++E+AR+LGG +
Sbjct: 480 RLGERGQVLTVTHLPQVAAQGHHHLFVHKVRNSDTTHTAVASLGKRERVEEVARMLGGID 539

Query: 545 VTRNTLANAKELLAA 559
           +T+ +LA+A++++ +
Sbjct: 540 LTKESLAHARKMVVS 554