Pairwise Alignments

Query, 559 a.a., DNA repair protein RecN from Rahnella sp. WP5

Subject, 540 a.a., DNA repair protein RecN from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  369 bits (946), Expect = e-106
 Identities = 219/550 (39%), Positives = 331/550 (60%), Gaps = 13/550 (2%)

Query: 13  ISNFAIVRELEIDFHAGMTAITGETGAGKSIAIDALGLCLGNRADGSMVRLGASRADICA 72
           + +F IV+ LE++  +G   +TGETGAGKSI IDAL L LG+R+D  +VR GA+R DI A
Sbjct: 1   LRDFVIVQSLELELGSGFGVLTGETGAGKSILIDALQLALGSRSDSGVVREGAARCDIAA 60

Query: 73  RFTLADTP-SAKHWLAEN--QLDEGLDCLLRRTISNDGRSRGFINGTPVPLSQLRELGQH 129
            F   D P S   WL E    +++GL  LLRRT+  +GRSR +ING+   ++QL+ L   
Sbjct: 61  EF---DAPASLTPWLEEQGFPVEDGL--LLRRTVDTEGRSRAWINGSAATVTQLKALADG 115

Query: 130 LIQIHGQHAHQLLLKPEHQKALLDAYSDQPLLLSEMRKAYQNWHQSCRQLAQYQQQMSER 189
           L+ IHGQHA Q L + E  + LLDAY+   +  +   +A+  W Q  + L    ++ +  
Sbjct: 116 LVDIHGQHAWQSLTRAEAVRDLLDAYAG--IDTAPAARAWAQWRQRRKALDSATEKQNSL 173

Query: 190 ESRRQLLQYQLKELNEFAPQAGEYEQIDEEYKRLANSGQLLSLSQNALYLLADGEEQNIV 249
           +   + L +Q+ EL++ +PQAGE+E+++ ++ RLAN+  LL  +Q A   L D ++ N  
Sbjct: 174 QQESERLAWQIAELDKLSPQAGEWEELNTQHSRLANAQGLLDAAQIAANAL-DEDDTNAA 232

Query: 250 SLLYSARNQLTELAELDSKMNDLIVMLDDASIQVSEASDELRHYSERLDMDPNRLFELEQ 309
           +L++ A + L   A ++ +    I  L+ A  QV +    L  YS   + DP  L  L+Q
Sbjct: 233 ALIHRALSALQAQAHIEPQFASAIEALEAALAQVQDTVHSLHQYSRHTERDPGSLEALDQ 292

Query: 310 RLSRQMNLARKHHVSAEDLPELHRQLLEEQQELDDQETNQAELSEAVQRHYQQAVAVAEQ 369
           RLS  ++LAR++  + E+L E+H Q   E  ++D Q  +   L  A +  ++      + 
Sbjct: 293 RLSLWVSLARRYRRTPEELAEVHAQWKTELAQID-QALDLEALQRAERADWKTFATALQA 351

Query: 370 LHEKRQYFADELTHLITQSMQALSMPHGKFKIQVQFEPEHLNMEGADRLEFQVTTNPGQP 429
           + ++RQ  A +L+  +T +MQ L M  G F++ +    E     GA+++EF+V  + G  
Sbjct: 352 ISKERQKAAPKLSKAVTATMQTLGMQGGVFEVAL-LPLEEPQAHGAEQVEFRVAGHAGAT 410

Query: 430 LQALAKVASGGELSRIALAIQVITAQKMETPALIFDEVDVGISGPTAAIVGRLLRQLGES 489
            + + KVASGGELSRIALAI V+T++  + P LIFDEVD GI G  A  VG+LLRQLG+ 
Sbjct: 411 PKPVGKVASGGELSRIALAISVVTSRLGQAPTLIFDEVDSGIGGAVAHTVGQLLRQLGKD 470

Query: 490 TQVMCVTHLPQVAGCGHQHYFVSKETDGEVTETQMNRLDKKARLQELARLLGGSEVTRNT 549
            QV+ VTHLPQVA C   H  VSK+  G  T++ +  +   AR++ELAR+LGG E +  +
Sbjct: 471 RQVLAVTHLPQVAACADHHLLVSKQAVGRQTQSTVEPIATDARVRELARMLGGGEQSEIS 530

Query: 550 LANAKELLAA 559
           LA+A+E+LAA
Sbjct: 531 LAHAREMLAA 540