Pairwise Alignments

Query, 1152 a.a., exodeoxyribonuclease V subunit gamma from Rahnella sp. WP5

Subject, 1150 a.a., exodeoxyribonuclease V subunit gamma from Pseudomonas simiae WCS417

 Score = 1185 bits (3066), Expect = 0.0
 Identities = 629/1159 (54%), Positives = 781/1159 (67%), Gaps = 26/1159 (2%)

Query: 1    MNSGLMVLHGNHSETLRDVLVSWMAAHPLSPLENEVILVQSNGINQWLKLALARDVTD-- 58
            +++G MV+HGN  + LR ++VSWM  +PL+PLENE+ LVQSNGI QWLKLALA D  D  
Sbjct: 7    LSAGFMVVHGNRLDELRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAEDPEDDD 66

Query: 59   -GGCGIAAALDIKLPARFFWQVYRAVLGKEQVPESSPFDRPLLTWRLIRLLPELLAEPVF 117
             GGCGIAAA+D++LP  F WQ+YR VLGK+++P  S  D+  LTWRL+RLLPEL+ +P F
Sbjct: 67   MGGCGIAAAIDVQLPGSFMWQLYRMVLGKDEIPPKSLLDKAPLTWRLMRLLPELIDQPHF 126

Query: 118  APLARFLKDDGDMRKLHQLAQRLADLFDQYQVYRADWLEDWGNGLDVLRTSRKGSEPLPE 177
             PL RFL  D D+RK +QLA+RLADLFDQYQVYRADWLEDW  G   LR  R  S+PL  
Sbjct: 127  EPLQRFLTHDTDLRKRYQLAERLADLFDQYQVYRADWLEDWAAGRHQLRNGRGESKPLNP 186

Query: 178  NLLWQPQLWRALLADVPENERNTSRAALHQRFLHYAQTIPEDQRPAGLPARLVVFGISSL 237
               WQ +LWRALL DV E     SRA +HQRF+    T+  ++ P GLP+R++VFGISSL
Sbjct: 187  ANCWQAELWRALLLDVGEEGMAESRAGVHQRFIERINTL--EKAPEGLPSRVIVFGISSL 244

Query: 238  PQQSLEVLAVLGRWTHIFMCVHNPCEHDWSDIIADKDLLRAERIRQLRKPGMPQVIAEDE 297
            P Q+LE LA L R++ + +CVHNPC H WSDI+ADKDLLR E  RQ RK GMP  I    
Sbjct: 245  PAQALEALAGLARFSQVLLCVHNPCRHHWSDIVADKDLLRNEYKRQARKAGMPVTIDPQT 304

Query: 298  LHQHAHPLLAAWGKQGRDYIGLLNEYDNHESYAAQLAPVIPRIDLFTSNGTDTLLHQLQE 357
            LHQHAHPLLAAWGKQGRDYI LL+ YD+  SY A       RIDLF+ +   TLL+QLQ+
Sbjct: 305  LHQHAHPLLAAWGKQGRDYISLLDSYDDPNSYRAAFRD--GRIDLFSDSEPTTLLNQLQD 362

Query: 358  DILQLRPLAETIDEWPAADVQHDDSLRFFITHSAQREVEVLHDRLLAALAADPTLKARDI 417
            DIL+LRPL ET + WPA D+Q D S+RF I HSAQREVE+LHD+LL   +ADP+L+ RD+
Sbjct: 363  DILELRPLNETRELWPAVDLQRDTSIRFHIAHSAQREVEILHDQLLQRFSADPSLRPRDV 422

Query: 418  IVMVPDINGYAPHIQAVFGLMERSDPRYIPFTVADQGPRQNNPLLGALESLLELPQSRFA 477
            IVMVPD++ YAPHI+AVFG +ER+DPR+IPFT+ DQG R  +PLL A+E LL+LP SRF 
Sbjct: 423  IVMVPDVDSYAPHIRAVFGQLERNDPRFIPFTLTDQGQRGRDPLLIAVEHLLKLPDSRFP 482

Query: 478  VSDLLDLLDVPSVRQRFGIEEEQLPLLHRWIRAANVRWGLHAEQRQSLELPLSPEQNSWF 537
            VS++LDLLDVP++R+RF I+E  LP LHRWI  A +RWGL+AEQR  L LP   EQNSW 
Sbjct: 483  VSEILDLLDVPALRERFAIKERDLPTLHRWIEGAGIRWGLNAEQRAGLGLPKELEQNSWR 542

Query: 538  FGLQRMLLGYAVGSGEAWKNIEPLDEIGGLDAALIGPLSHLLNCLDDTWRQLREPAPPQE 597
            FGL+RMLLGYAVG+G A   IEP DEIGGLDAALIGPL  LL+ L D  + L  PA P +
Sbjct: 543  FGLRRMLLGYAVGTGAACDGIEPYDEIGGLDAALIGPLVALLDALSDAHQALSLPASPTQ 602

Query: 598  WGRRLRHILSQYFSEDDGEDGFILVRLHGELEIWLEACESVDLQAELPLSVVRDHWLAQF 657
            WG RL+ ++  +F      D ++L +L    E WLE CESV LQ ELPL+VVR+ WLA  
Sbjct: 603  WGERLQRLIQLFFLPSSEHDDYLLGQLEQLRETWLETCESVGLQDELPLTVVREAWLAGL 662

Query: 658  DQSGLTQPFFGGAVTFATLMPMRAIPFRHVHLLGMNDGDYPRNRVPMDFDLMGRDYRPGD 717
            DQ  L+Q F  GAV F TLMPMRAIPF+ + LLGMNDGDYPR + P+DFDLMG DYRPGD
Sbjct: 663  DQGRLSQRFLAGAVNFCTLMPMRAIPFKLICLLGMNDGDYPRAQPPLDFDLMGSDYRPGD 722

Query: 718  RSRREDDRYLFLEALLSARERLHISWVGRSIHDNTERPPSVLVAQLRDHLAAGWKAQNGE 777
            RSRREDDRYL LEALLSAR++L++SWVGRSI DN++RP SVL+ QLRDHLA+GW   N +
Sbjct: 723  RSRREDDRYLLLEALLSARDQLYVSWVGRSIRDNSDRPASVLIGQLRDHLASGWHLANSD 782

Query: 778  -DLLHALTTEHRLQPFNRDYFSQGSPLFSYAHEWRAGLEAEAAAVAAQPLQPVEQEGALT 836
              L+ A+T EH LQPF+  YF +G  LFSYA EW+   EA  A      L P +QE  L+
Sbjct: 783  KPLIEAMTQEHPLQPFSARYFHEGDALFSYAREWQLLHEASDALPTEHDLAPHQQEEPLS 842

Query: 837  LRQLSDFLSDPVRSFFRQRLNIYFELEDPGSEDQEPFDINALENWRLQDELIRAQKWALE 896
            L QL DFL +PV+ FF QRL ++FE  +    D+EPF ++AL+ + L D L+ A   AL 
Sbjct: 843  LGQLQDFLRNPVKHFFSQRLKVFFEAAEVPLADEEPFVLDALQRYSLSDSLLNA---ALT 899

Query: 897  AGVSRQDVLRQQLERIERRGELAPGEFAAVLSDDLAEPMDTLFASYQQVLDAWPQP-LAN 955
                    L  Q  R++  G L    F   L ++L EP+  L   YQQ+L  WP P    
Sbjct: 900  RPDQLDQTLNAQALRLQGSGLLPMVGFGECLRNELIEPLPDLLRRYQQLLALWPTPHTGA 959

Query: 956  EAVEDKTGGVTFSDWLSELRANAAGGRARV--VLESTGIIKDRAYRFDRLLPYWVAHLAG 1013
            E V  +  GV    W+S L   + GG   V  +  S G IK R  ++ RL+  WV H+  
Sbjct: 960  EPVSFEHHGVQLEGWISGLHRRSDGGLLSVTTIPNSIGSIKTR--KWHRLIRPWVNHVVA 1017

Query: 1014 HLDGQPMHTFIVSKNGTAELPPLEIAYARELWDTLIETWKIGQLRPLPLAVKTAFVWLKK 1073
               G P+ T +V+ + T  LPPL+ A A+E+   L+  W  G  +PLP+AVKTAF WL  
Sbjct: 1018 CACGLPLSTGLVASDDTLLLPPLDKANAQEVLGHLLLAWHAGMSKPLPVAVKTAFAWL-- 1075

Query: 1074 EGTAHSATDS-DAWLAARDSYENHDPANMKFGERDSNAYLARAWPDFAALWSDGEFARLA 1132
                 S TD   A  AA  +YE     N   GER     L R +PD+A L +  EF    
Sbjct: 1076 -----SQTDPVKAEAAAVKTYEGDGLNNE--GERRETPALTRQFPDYATLIASEEFEGWC 1128

Query: 1133 DVLLAPLINYLSRSKKGDK 1151
            + L  PL+N   RS  G++
Sbjct: 1129 ETLYRPLLNAPWRSLTGEE 1147