Pairwise Alignments

Query, 1152 a.a., exodeoxyribonuclease V subunit gamma from Rahnella sp. WP5

Subject, 1123 a.a., Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  604 bits (1558), Expect = e-176
 Identities = 418/1157 (36%), Positives = 588/1157 (50%), Gaps = 109/1157 (9%)

Query: 5    LMVLHGNHSETLRDVLVSWMAAHPLS-PLENEVILVQSNGINQWLKLALARDVTDGGCGI 63
            L V H N  + L  ++   +    L  P E E+ILVQS G+ QWL++ L++       GI
Sbjct: 2    LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKF-----GI 56

Query: 64   AAALDIKLPARFFWQVYRAVLGKEQVPESSPFDRPLLTWRLIRLLPELLAEPVFAPLARF 123
            AA +   LPA F W+++  VL    +P+ S F +  ++W+L+ LLP+LL +  F  L  +
Sbjct: 57   AANIAFPLPASFIWEMFVRVL--PDIPKESAFSKQSMSWKLMTLLPQLLDKDEFVLLRHY 114

Query: 124  LKDDGDMRKLHQLAQRLADLFDQYQVYRADWLEDWGNGLDVLRTSRKGSEPLPENLLWQP 183
            L DD D RKL QL+ R ADLFDQY VYR DWL  W  G  V        E L E   WQ 
Sbjct: 115  LTDDTDKRKLFQLSARAADLFDQYLVYRPDWLTQWEAGKTV--------EGLGEAQNWQA 166

Query: 184  QLWRALLADVPE-NERNTSRAALHQRFLHYAQTIPEDQRPAGLPARLVVFGISSLPQQSL 242
             LW+AL+       +    RA L+QRF+   ++      P GLP+R+ + GIS+LP   L
Sbjct: 167  PLWKALVEYTAALGQPRWHRANLYQRFIQTLESATAC--PPGLPSRVFICGISALPPVYL 224

Query: 243  EVLAVLGRWTHIFMCVHNPCEHDWSDIIADKDLLRAERIRQ------------LRKPGMP 290
              L  LG+   I +   NPC + W DI  D   L     RQ             R+   P
Sbjct: 225  RALQALGKHIEIHLLFTNPCRYYWGDI-KDPAWLAKLMARQRRHSFEDRHLPLFRENQNP 283

Query: 291  QVIAEDELHQH-AHPLLAAWGKQGRDYIGLLNEYDNHESYAAQLAPVIPRIDLFTSNGTD 349
            + +   +  Q   +PLLA+WGK GRDYI LL+E +N +            +D F     D
Sbjct: 284  EALFNSDGEQDIGNPLLASWGKLGRDYIYLLSELENSQE-----------LDAFVDITPD 332

Query: 350  TLLHQLQEDILQLRPLAET---IDEWPAADVQH-----DDSLRFFITHSAQREVEVLHDR 401
             LLH++Q DIL+L   A     ++E+  +D +      D+SL F + HS QREVE+LHDR
Sbjct: 333  NLLHRIQADILELESHAVAGVNLEEYSRSDNKRLLDPEDNSLSFHVCHSPQREVEILHDR 392

Query: 402  LLAALAADPTLKARDIIVMVPDINGYAPHIQAVFGLMERSDPRYIPFTVADQGPRQNNPL 461
            LLA L ADPTL  RDIIVMV DI+ Y+P IQAVFG       RY+P+ ++D+  RQ++P+
Sbjct: 393  LLAMLEADPTLTPRDIIVMVADIDSYSPFIQAVFG--SAPTERYLPYAISDRRARQSHPV 450

Query: 462  LGALESLLELPQSRFAVSDLLDLLDVPSVRQRFGIEEEQLPLLHRWIRAANVRWGLHAEQ 521
            L A  SLL LP SRF   D+L LLDVP +  RF I EE L  L  W+  + +RWG+  + 
Sbjct: 451  LQAFISLLSLPDSRFVSEDVLALLDVPVLAARFTINEEGLRYLRLWVNESGIRWGIDDDN 510

Query: 522  RQSLELPLSPEQNSWFFGLQRMLLGYAVGSGEA-WKNIEPLDEIGGLDAALIGPLSHLLN 580
             + LELP +  Q++W FGL RMLLGYA+ S +  W+++ P DE  GL A L+G L+ LL 
Sbjct: 511  VRELELPATG-QHTWQFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569

Query: 581  CLDDTWRQLREPAPPQEWGRRLRHILSQYFSED-DGEDGFILVRLHGELEIWLEACESVD 639
             L+   R L +  P +EW    R + + +F  D D E    L+      + W +A  +  
Sbjct: 570  QLNIWRRGLAQERPLEEWLPVCRDMFNDFFLPDADTEAAMTLIE-----QQW-QAIIAEG 623

Query: 640  LQAE----LPLSVVRDHWLAQFDQSGLTQPFFGGAVTFATLMPMRAIPFRHVHLLGMNDG 695
            + AE    +P+S++RD    + DQ  ++Q F  G +   TLMPMR+IPFR V LLGMNDG
Sbjct: 624  VAAEYGDAVPISLLRDELAQRLDQERISQRFLAGPINICTLMPMRSIPFRVVCLLGMNDG 683

Query: 696  DYPRNRVPMDFDLMGRDYRPGDRSRREDDRYLFLEALLSARERLHISWVGRSIHDNTERP 755
             YPR   P+ FDLM +    GDRSRR+DDRYLFLEAL+SA++ L+IS++GRSI DN+ER 
Sbjct: 684  VYPRQLAPLGFDLMSQKPMRGDRSRRDDDRYLFLEALISAQQTLYISYIGRSIQDNSERF 743

Query: 756  PSVLVAQLRDHLAAGWKAQNGEDLL---------HALTTEHRLQPFNRDYFSQGSPLFSY 806
            PSVLV +L D++         E L            +T  H   PF+   +  G    SY
Sbjct: 744  PSVLVQELVDYIGQSHYLPGDETLTCDESEARVKAHITRLHTRMPFDAQNYQPGEQQ-SY 802

Query: 807  AHEW--RAGLEAEAAAVAAQPLQPVEQEGALTLRQLSDFLSDPVRSFFRQRLNIYFELED 864
            A EW   A    +A +   QPL P      LTL  L  F + PVR+FF+ RL + F  E+
Sbjct: 803  AREWLPAASQSGKAHSDFVQPL-PFTMPETLTLESLQRFWAHPVRAFFQMRLQVNFRSEE 861

Query: 865  PGSEDQEPFDINALENWRLQDELIRAQKWALEAGVSRQDVLRQQLERIERRGELAPGEFA 924
                D EPF++  L  ++L  +L+          +  +D   +   R    GEL  G F 
Sbjct: 862  SEIPDAEPFELEGLTRYQLNQQLLNT--------LVEEDDAERLFRRFRAAGELPYGAFG 913

Query: 925  AVLSDDLAEPMDTLFASYQQVLDAWPQPLANEAVEDKTGGVTFSDWLSELRANA-AGGRA 983
             +  D   + M  L +     + A  +P  +  V+    GV  + WL +++ +     R 
Sbjct: 914  EIFWDAQCQEMQQLASR----VIACRKPSQSLEVDLLCNGVQLTGWLPQVQEDGLLRWRP 969

Query: 984  RVVLESTGIIKDRAYRFDRLLPYWVAHLAGHLDGQPMHT-FIVSKNGTAELPPLEIAYAR 1042
             ++  + G+              W+ HL     G    +   + K G    PPL+   A 
Sbjct: 970  ALISVAQGV------------QLWLEHLVYCASGGSGESRLFLRKEGEWRFPPLDKTQAM 1017

Query: 1043 ELWDTLIETWKIGQLRPLPLAVKTAFVWLKKEGTAHS---ATDSDAWLAARDSYENHDPA 1099
                 LIE ++ G   PL +  ++   W+K    A +     D D    AR  +      
Sbjct: 1018 AYLAQLIEGYREGMSSPLLVLPESGGAWIKACYDAENDVMLDDDDTLQKARTKFLQAYEG 1077

Query: 1100 NMKFGERDSNAYLARAW 1116
            NM       + +  R W
Sbjct: 1078 NMMVSGEGEDIWYQRLW 1094