Pairwise Alignments

Query, 684 a.a., exodeoxyribonuclease V subunit alpha from Rahnella sp. WP5

Subject, 691 a.a., ATP-dependent DNA helicase and dsDNA/ssDNA exonuclease, ssDNA endonuclease from Pseudomonas putida KT2440

 Score =  650 bits (1676), Expect = 0.0
 Identities = 373/683 (54%), Positives = 454/683 (66%), Gaps = 33/683 (4%)

Query: 8   DIAQLLASWVECGWLRELDRALVTFLAKEAPDAHPLLLLATALTSYQLGRGHVCLDLQAT 67
           D+ QLL  WVE GWLR LDRA V+FL + AP + PLLLLA AL S+QLG GHVCLDLQ T
Sbjct: 29  DLLQLLDRWVERGWLRALDRAFVSFLEERAPGSDPLLLLAAALASHQLGHGHVCLDLQQT 88

Query: 68  LDDSAFSLSLPPEGDHADGAVIRPAAVLDDLSLQEWLAALVHPTLV--GHHEGNS--PLV 123
           L +  F+LSLPPEGD   G ++ P+ +L +L L  WL  +    LV  G   G    PLV
Sbjct: 89  LAEPDFALSLPPEGDALIGPLLLPSQLLANLDLNAWLQRISASPLVAAGDTPGQQARPLV 148

Query: 124 LTGQRLYLRRYWQYEQNVRAAIEQRLARSALHTLPVESLRAPLTALFPADAKSDIANWQK 183
            +G+RLYLRRYW YE+ +  A+ QRL+++     P   L   L  LF   A +   +WQK
Sbjct: 149 RSGERLYLRRYWSYERRIDQALRQRLSQAEA---PPADLPERLAQLFEGGAPAGQVDWQK 205

Query: 184 LACALAAGSAFSIITGGPGTGKTTTVVRLLALLQTLALEENGQPLRIRLAAPTGKAAARL 243
           LACALA  + FSIITGGPGTGKTTTVVRLLALLQ  A+E+ G+PLRIRLAAPTGKAAARL
Sbjct: 206 LACALATRAGFSIITGGPGTGKTTTVVRLLALLQAPAVEQ-GRPLRIRLAAPTGKAAARL 264

Query: 244 NESIAGAVSKLDLSALGNGNAVRESINTDVVTLHRLLGSRPDTRHFRHHPGNPLMLDVLV 303
            ESI   V +L +SA      VR  I T+V T+HRLLGSRP +RHFRHH GNPL LDVLV
Sbjct: 265 TESIGQQVERLQVSA-----EVRGQIPTEVSTVHRLLGSRPGSRHFRHHAGNPLPLDVLV 319

Query: 304 VDEASMVDLEMMAALLAALPEQARLILLGDKDQLASVEAGALLSELCQRANGGHYLPHTR 363
           VDEASM+DLEMMA LL ALP +ARL+LLGDKDQLASVEAGA+L +LC+ A  G Y P T 
Sbjct: 320 VDEASMIDLEMMANLLDALPPRARLVLLGDKDQLASVEAGAVLGDLCRDAEEGFYSPATA 379

Query: 364 DWLQSVTGEQVPDSLV---DPQGTAMDQAVVMLRHSYRFDAQSGIGQLAEAVNDGDVKAL 420
            WLQ V+GE +  S +   D Q   + Q VVMLR S RF   SGIGQLA  VN  D  A 
Sbjct: 380 AWLQQVSGESLAGSGLKAGDEQRHPLAQQVVMLRFSRRFGEGSGIGQLARLVNRQDAHAA 439

Query: 421 KQVWKHGYADLAQLTLSADDDAELRDWVVKGGAKQFPTAARREGVEPPVGYQHYLNVMIQ 480
           + +     AD+  L+L  + D      ++ G            G + P GY+ YL  + +
Sbjct: 440 RNLLAAPPADVHSLSLKHEQDRAFDRLLLDG---------LNRGTDGPQGYRSYLRTLGR 490

Query: 481 ARPADNE--PPEAFNRWAARVLLAYSQFQLLCALRGGRWGVEELNQRIADILRKEGLLKA 538
            RPA +      A+ +WA +VL ++  FQLLCA+R G WGVE LN+R+A +L   GL+ +
Sbjct: 491 YRPALDTAFDDPAWEQWAGKVLRSFEDFQLLCAVRRGAWGVEGLNERVARVLHNAGLIDS 550

Query: 539 SIGWYPGRPVLVTRNDYSQRLMNGDIGITLEIPHRLADGTVVPTLRVAFLAGDGTQDIRW 598
              WY GRPVLVTRNDY   LMNGDIGI L +P    D    P LRVAF   DG+  +R+
Sbjct: 551 QQPWYEGRPVLVTRNDYGLGLMNGDIGIALRLP----DEHGQPLLRVAFPRNDGSGGVRF 606

Query: 599 VMPGRLQAVETVFAMTVHKSQGSEFTHTALLLPENLSPILTRELIYTGITRARHWFSLGC 658
           V+P RL  VETVFAMTVHKSQGSEF+HTAL+LPE L+P+LT+EL+YTGITRA+H FSL  
Sbjct: 607 VLPSRLNEVETVFAMTVHKSQGSEFSHTALVLPEALNPVLTKELVYTGITRAKHCFSL-- 664

Query: 659 VGGMNAVLPDAVKRRVLRASGLI 681
           V     +  +AV R+V R SGL+
Sbjct: 665 VEPRQGIFEEAVARKVRRISGLM 687