Pairwise Alignments

Query, 684 a.a., exodeoxyribonuclease V subunit alpha from Rahnella sp. WP5

Subject, 611 a.a., Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  408 bits (1049), Expect = e-118
 Identities = 275/676 (40%), Positives = 375/676 (55%), Gaps = 82/676 (12%)

Query: 9   IAQLLASWVECGWLRELDRALVTFLAKEAPDAHPLLLLATALTSYQLGRGHVCLDL-QAT 67
           I + L   VE   LR +D     F    A +  P + LA AL S+  G GHVCL L + T
Sbjct: 3   IQERLLEAVEQKLLRPID---AQFALTVAGNDDPAVTLAAALLSHDAGEGHVCLPLSRLT 59

Query: 68  LDDSAFSLSLPPEGDHADGAVIRPAAVLDDLSLQEWLAALVHPTLVGHHEGNSPLVLTGQ 127
           L + A  L +              A + +  +  +W   L+    V   +  +PL+L G+
Sbjct: 60  LTEEAHPLLV--------------ACISETATPIDWKKRLLASAAVSCGDSPAPLILCGE 105

Query: 128 RLYLRRYWQYEQNVRAAIEQRLARSALHTLPVESLRAPLTALFPADAKSDIANWQKLACA 187
           RLYL R W  E+ V     +     A+     + L   L ALFP    +D  NWQK+A A
Sbjct: 106 RLYLNRMWCNERTVARFFNEVNQAIAVDE---DQLSRILDALFPP---TDEVNWQKVAAA 159

Query: 188 LAAGSAFSIITGGPGTGKTTTVVRLLALLQTLALEENGQPLRIRLAAPTGKAAARLNESI 247
           +A     S+I+GGPGTGKTTTV +LLA L  +A   +G+  RIRLAAPTGKAAARL ES+
Sbjct: 160 VALTRRISVISGGPGTGKTTTVAKLLAALIQMA---DGERCRIRLAAPTGKAAARLTESL 216

Query: 248 AGAVSKLDLSALGNGNAVRESINTDVVTLHRLLGSRPDTRHFRHHPGNPLMLDVLVVDEA 307
             A+ +L L+     +A ++ I  D  TLHRLLG++P ++  RHH GNPL LDVLVVDEA
Sbjct: 217 GAALRQLPLT-----DAQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEA 271

Query: 308 SMVDLEMMAALLAALPEQARLILLGDKDQLASVEAGALLSELCQRANGGHYLPHTRDWLQ 367
           SM+DL MM+ L+ +LP   R+I LGD+DQLASVEAGA+L ++C   N G      R  L 
Sbjct: 272 SMIDLPMMSRLIDSLPPHGRVIFLGDRDQLASVEAGAVLGDICAYVNAGFTAERARQ-LS 330

Query: 368 SVTGEQVPDSLVDPQGTAMDQAVVMLRHSYRFDAQSGIGQLAEAVNDGDVKALKQVWKHG 427
            +TG  +P      Q  ++  ++ +L+ SYRF + SGIG+LA A+N GD  A++ V++ G
Sbjct: 331 RLTGSAIPAG-AGTQAASLRDSLCLLQKSYRFGSDSGIGKLAAAINCGDRSAIQAVFQQG 389

Query: 428 YADLAQLTL-SADDDAELRDWVVKGGAKQFPTAARREGVEPPVGYQHYLNVMIQARPADN 486
           ++D+ + TL S+DD A + D                   E   GY  YL ++      + 
Sbjct: 390 FSDIEKRTLQSSDDYAGMLD-------------------EALAGYGRYLRLL-----HEK 425

Query: 487 EPPEAFNRWAARVLLAYSQFQLLCALRGGRWGVEELNQRIADILRKEGLLK--ASIGWYP 544
             PEA       +L A++++QLLCALR G +GV  LN RI   + ++  ++      WY 
Sbjct: 426 ATPEA-------ILQAFNEYQLLCALREGPFGVRGLNDRIEQAMVQQRKIQRHPHSRWYE 478

Query: 545 GRPVLVTRNDYSQRLMNGDIGITLEIPHRLADGTVVPTLRVAFLAGDGTQDIRWVMPGRL 604
           GRPV++ RND +  L NGDIGI L+             LRV F+  DGT  I+ V P RL
Sbjct: 479 GRPVMIARNDSALGLFNGDIGIALDRGQ---------GLRVWFVMPDGT--IKSVQPSRL 527

Query: 605 QAVETVFAMTVHKSQGSEFTHTALLLPENLSPILTRELIYTGITRARHWFSLGCVGGMNA 664
              +T +AMTVHKSQGSEF H AL+LP   SP++TREL+YT +TRAR   SL        
Sbjct: 528 PEHDTTWAMTVHKSQGSEFDHAALILPSQRSPVVTRELVYTAVTRARRRLSL---YADER 584

Query: 665 VLPDAVKRRVLRASGL 680
           +L  A+  R  R SGL
Sbjct: 585 ILAGAIVTRTERRSGL 600