Pairwise Alignments

Query, 228 a.a., ABC transporter permease subunit from Rahnella sp. WP5

Subject, 239 a.a., L-lysine and D-lysine ABC transporter, permease component 1 (from data) from Pseudomonas putida KT2440

 Score =  150 bits (379), Expect = 2e-41
 Identities = 77/216 (35%), Positives = 132/216 (61%), Gaps = 1/216 (0%)

Query: 4   GYSQVIIQGTLVTLELAISSVILALVIGLIGAGGKLSKNRIVSGFFGCYTTLIRGVPDLV 63
           G+ Q ++ G LVT+ LA++ + + L +GL+ A    S+ R+   +   ++T+ RG+P+L+
Sbjct: 14  GWGQALLAGALVTVSLALACLPIGLPLGLVVALAARSRKRLPRAWATTFSTVFRGLPELL 73

Query: 64  LMLLIFYGLQIALNSVTESLGLT-QIDIDPMSAGIITLGFIYGAYFTETFRGAFMAVPRG 122
            +L+I+YG QIA   +  ++G   +  I+   A +I    ++ A+ +E +  AF  +P+G
Sbjct: 74  TLLIIYYGCQIAAQKILAAMGYQGEFLINTFLAAMIAFSLVFAAFSSEIWLAAFKTLPKG 133

Query: 123 QIEAATAFGFSGSQIFRRILFPAMMRFALPGIANNWQVILKATALVSLLGLNDVVKATQL 182
           Q+EA +A G S    F ++L P + R ALPG++NNW  +LK T+LVS + L D+++ T L
Sbjct: 134 QLEACSALGLSKRTGFFKVLLPQLTRIALPGLSNNWLSLLKDTSLVSTISLVDLMRQTNL 193

Query: 183 AGKGTYQPFYFAIVAGVVYLVFTTLSNGVLVWLDRR 218
           A   T +P +F  VA + YL+F  LS  V  +++RR
Sbjct: 194 AVSVTKEPMFFYGVACLGYLLFAALSGRVFAYIERR 229