Pairwise Alignments

Query, 237 a.a., ABC transporter permease from Rahnella sp. WP5

Subject, 232 a.a., ABC transporter for L-Arginine, permease component 2 (from data) from Pseudomonas simiae WCS417

 Score =  206 bits (523), Expect = 4e-58
 Identities = 107/216 (49%), Positives = 142/216 (65%), Gaps = 1/216 (0%)

Query: 22  GLAITLWLLISSVVIGGLLAVPMAVGRVSSNKFLRYPIWLYTYIFRGTPLYVQLLVFYSG 81
           GL  TL LL  S+  G L A+P+ + RVS    +    WLYTY+ RGTP+ VQL + Y G
Sbjct: 18  GLLTTLKLLAISLFFGLLAALPLGLMRVSKQPIVNGAAWLYTYVIRGTPMLVQLFLIYYG 77

Query: 82  MYSLEIVRGTDFLNAFFRSGLNCTILALTLNTCAYTTEIFAGAIRAVPHGEIEAANAYGF 141
           +   E VR + FL     S   C  LA  +NT AYT EI AG+++A P+GEIEAA A G 
Sbjct: 78  LAQFEAVRES-FLWPLLSSATFCACLAFAINTSAYTAEIIAGSLKATPNGEIEAAKAMGM 136

Query: 142 SRFKLYTCIILPSALRTALPAYSNEVILMLHSTALAFTATVPDVLKIARDINSATYQPFY 201
           SR+KLY  I+LPSALR ALP YSNEVI+ML +T+LA   T+ D+   AR +N+  Y PF 
Sbjct: 137 SRYKLYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITGAARTVNAQFYLPFE 196

Query: 202 AFGIAAVIYLCVSFVLIGLFRKAEKRWLAHVKPQAH 237
           A+  A V YLC++F+L+ LF+ AE+RWL+++ P+ H
Sbjct: 197 AYITAGVFYLCLTFILVRLFKLAERRWLSYLAPRKH 232