Pairwise Alignments

Query, 953 a.a., two-component system sensor histidine kinase RcsC from Rahnella sp. WP5

Subject, 949 a.a., hybrid sensory kinase in two-component regulatory system with RcsB and YojN (RefSeq) from Escherichia coli BW25113

 Score = 1140 bits (2950), Expect = 0.0
 Identities = 584/961 (60%), Positives = 736/961 (76%), Gaps = 20/961 (2%)

Query: 1   MKYLASFRTTLKISRYLFRVLALMLWTLGVLLTTFYVLNIFHNKESEIRDEDNLNYDLAQ 60
           MKYLASFRTTLK SRY+FR LAL+LW L    + FY++N  H +ESEIR E NL+ D AQ
Sbjct: 1   MKYLASFRTTLKASRYMFRALALVLWLLIAFSSVFYIVNALHQRESEIRQEFNLSSDQAQ 60

Query: 61  SYIKNSNDVMHSIKFMAENRLSASVNGLDIINGIIS-----TKNTAPSYLSLFPESDCSQ 115
            +I+ ++DVM  +K++AENRLSA        NG++S     T+   P++  LF +SDCS 
Sbjct: 61  RFIQRTSDVMKELKYIAENRLSAE-------NGVLSPRGRETQADVPAFEPLFADSDCSA 113

Query: 116 INDSYRNSLASLGNMIHYWKDNFSDAYDLNRVFLISGESLCLVDFGISSEPFERESQEQL 175
           +++++R SL SL   + YW+DNFS AYDLNRVFLI  ++LC+ +FG+   P ER++   L
Sbjct: 114 MSNTWRGSLESLAWFMRYWRDNFSAAYDLNRVFLIGSDNLCMANFGLRDMPVERDTA--L 171

Query: 176 KSLHEKIMQYRNSKSTDKENSLYWVSQSGSKDSGNLYVLTPIYVGNKLEALMGIQQNLRA 235
           K+LHE+I +YRN+   D  ++LYW+S+      G  Y LTP+Y+ N+L+AL+G++Q +R 
Sbjct: 172 KALHERINKYRNAPQDDSGSNLYWISEGPRPGVGYFYALTPVYLANRLQALLGVEQTIRM 231

Query: 236 EDLLNPNSQHTAVTLLDEDDQPLLGISEDGHYSAAPGD--YPQASSFFGYVNGYKDLVYK 293
           E+   P +    VT+LDE+   L+ ++  G  S   GD  + Q  S+FGY  G+++LV K
Sbjct: 232 ENFFLPGTLPMGVTILDENGHTLISLT--GPESKIKGDPRWMQERSWFGYTEGFRELVLK 289

Query: 294 KPLTPSSLSVVYSMPFNTVIERFKILIFNAVLLNIFSGLLLFILAWVFERKMFLPAEENA 353
           K L PSSLS+VYS+P + V+ER ++LI NA+LLN+ +G  LF LA ++ER++F+PAE +A
Sbjct: 290 KNLPPSSLSIVYSVPVDKVLERIRMLILNAILLNVLAGAALFTLARMYERRIFIPAESDA 349

Query: 354 FRLEEHEQFNHKIVASAPVGISILRISDGVNILSNELAHNYISMLTQEDRQRITRIICDQ 413
            RLEEHEQFN KIVASAPVGI ILR +DGVNILSNELAH Y++MLT EDRQR+T+IIC Q
Sbjct: 350 LRLEEHEQFNRKIVASAPVGICILRTADGVNILSNELAHTYLNMLTHEDRQRLTQIICGQ 409

Query: 414 QTNFVDVITKNNNNIQLSFVHSRYRNEDVAICVLIDVSARVKMEESLQEMANAAEQASQS 473
           Q NFVDV+T NN N+Q+SFVHSRYRNE+VAICVL+DVS+RVKMEESLQEMA AAEQASQS
Sbjct: 410 QVNFVDVLTSNNTNLQISFVHSRYRNENVAICVLVDVSSRVKMEESLQEMAQAAEQASQS 469

Query: 474 KSMFLATVSHELRTPLYGIIGNLDLLQTQGLPQGVDRLVTAMNNSSALLLKIISDILDFS 533
           KSMFLATVSHELRTPLYGIIGNLDLLQT+ LP+GVDRLVTAMNNSS+LLLKIISDILDFS
Sbjct: 470 KSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLVTAMNNSSSLLLKIISDILDFS 529

Query: 534 KIESEQLKIEPQEFSCREVITHIAGNYLPLVVKKHLGLYCFIEHNVPLSFNGDPVRLQQV 593
           KIESEQLKIEP+EFS REV+ HI  NYLPLVV+K LGLYCFIE +VP++ NGDP+RLQQV
Sbjct: 530 KIESEQLKIEPREFSPREVMNHITANYLPLVVRKQLGLYCFIEPDVPVALNGDPMRLQQV 589

Query: 594 ISNILNNAIKFTDTGCIVLNVRTCGNYLEFQVRDTGVGIPEREITRLFDPFFQVGTGVQR 653
           ISN+L+NAIKFTDTGCIVL+VR  G+YL  +VRDTGVGIP +E+ RLFDPFFQVGTGVQR
Sbjct: 590 ISNLLSNAIKFTDTGCIVLHVRADGDYLSIRVRDTGVGIPAKEVVRLFDPFFQVGTGVQR 649

Query: 654 HFQGTGLGLAICEKLINLMDGDIEVESEPGLGSSFTVRIPLYNATFPSGEPLDNWQDKTV 713
           +FQGTGLGLAICEKLI++MDGDI V+SEPG+GS FTVRIPLY A +P  + ++    K  
Sbjct: 650 NFQGTGLGLAICEKLISMMDGDISVDSEPGMGSQFTVRIPLYGAQYPQKKGVEGLSGKRC 709

Query: 714 WLDVRNAYLESYLMQLMRYHGANVQRCEPELQSQREDVLITDTPLIHKGELAAQIEFSIG 773
           WL VRNA L  +L   ++  G  V   E + +   EDVLITD  +  K +  A + F   
Sbjct: 710 WLAVRNASLCQFLETSLQRSGIVVTTYEGQ-EPTPEDVLITDEVVSKKWQGRAVVTFCRR 768

Query: 774 HIGPPVETRPGYWIHSTSTPLEITALLNRIYRLETTAEEGGSATPEAAVA-QDYSDITLL 832
           HIG P+E  PG W+HS + P E+ ALL RIY +E  +++  +A P    A  D  D+ +L
Sbjct: 769 HIGIPLEKAPGEWVHSVAAPHELPALLARIYLIEMESDDPANALPSTDKAVSDNDDMMIL 828

Query: 833 VVDDHPINRRLLADQLGTMGYIVVTANDGIDALDAMRAHEIDIVLSDVNMPRLDGYGLTA 892
           VVDDHPINRRLLADQLG++GY   TANDG+DAL+ +  + IDIVLSDVNMP +DGY LT 
Sbjct: 829 VVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQ 888

Query: 893 KLRELGHTLPVIGVTANALAEQRQRCLEAGMDNCLSKPVTLETLRDTLRYYSALVRRKRQ 952
           ++R+LG TLPVIGVTANALAE++QRCLE+GMD+CLSKPVTL+ ++ TL  Y+  VR+ R 
Sbjct: 889 RIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTLDVIKQTLTLYAERVRKSRD 948

Query: 953 S 953
           S
Sbjct: 949 S 949