Pairwise Alignments

Query, 587 a.a., DEAD/DEAH box helicase from Rahnella sp. WP5

Subject, 586 a.a., ATP-dependent RNA helicase YejH from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  976 bits (2522), Expect = 0.0
 Identities = 478/585 (81%), Positives = 519/585 (88%)

Query: 3   VFTLRPYQQDAVDATLRHFRQHDEPAVIVLPTGAGKSLVIAELARVARGRVLVLAHVKEL 62
           +FTLRPYQQ+AVDATL HFR+H  PAVIVLPTGAGKSLVIAELARVARGRVLVLAHVKEL
Sbjct: 2   IFTLRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAHVKEL 61

Query: 63  VAQNHSKYLSYGLEADIFAAGLNLKQSSGKVIFGSVQSVAPNLAEFSGEFSLLIVDECHR 122
           VAQNH+KY + GLEADIFAAGL  K+S GKV+FGSVQSVA NL  F  EFSLLIVDECHR
Sbjct: 62  VAQNHAKYCALGLEADIFAAGLKRKESQGKVVFGSVQSVARNLDAFQEEFSLLIVDECHR 121

Query: 123 ISDDDNSQYQQIIGHLKAQNPRLRLLGLTATPYRLGKGWIYQYHHQGIVRGDANSLFRDC 182
           I DD++SQYQQI+ HL   NP LRLLGLTATP+RLGKGWIYQ+H+ G+VRG+ N+LFRDC
Sbjct: 122 IGDDEDSQYQQILTHLSKVNPHLRLLGLTATPFRLGKGWIYQFHYHGMVRGNDNALFRDC 181

Query: 183 IYELPLRYMIKNGFLVPPERLDMPVVSYDFSRLQASSNGLFSEADLNDELRQQKRITPHI 242
           IYELPLRYMIK+G+L PPERLDMPVV YDFSRLQA SNGLFSEADLN EL++Q+RITPHI
Sbjct: 182 IYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRITPHI 241

Query: 243 ISQIIEFAQDRKGVMIFASTVEHAGEIFGLLPKGEAALISAQTHAVERDRLITAFKAQQL 302
           ISQI+EFAQ RKGVMIFA+TVEHA EI GLLP  +AALI+  T   ERD LI  FKAQ+ 
Sbjct: 242 ISQIMEFAQTRKGVMIFAATVEHAKEIVGLLPADDAALITGDTPGPERDALIDNFKAQRF 301

Query: 303 RYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNPH 362
           RYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNPH
Sbjct: 302 RYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNPH 361

Query: 363 DLFTPEVGSHKPAGDNKPVQVFCPACGFANIFWGKTTEDGTVIEHFGRRCQGVLEDDEGN 422
           DL+ PEVGS K   DN PVQVFCPACGFAN FWGKTT DGT+IEHFGRRCQG  EDD+G+
Sbjct: 362 DLYAPEVGSPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDDGH 421

Query: 423 REQCDFRFRFKSCPHCGAENDIAARRCHQCQEILVDPDDMLKAALRLKDALVLRCGGMNL 482
           REQCDFRFRFK+CP C AENDIAARRC +C  ILVDPDDMLKAALRLKDALVLRC GM +
Sbjct: 422 REQCDFRFRFKNCPQCNAENDIAARRCRECDAILVDPDDMLKAALRLKDALVLRCSGMTM 481

Query: 483 QNGRDDKGEWLKITYYDEDGADVSERFRLTTPAQRMAFLHNFLRPHQRAPGVPLEWNTAA 542
           Q+G+D+KGEWLKITYYDEDGADVSERFRL TPAQR AF   F+RPH R PGVPL W TAA
Sbjct: 482 QHGQDEKGEWLKITYYDEDGADVSERFRLHTPAQRTAFEQLFIRPHTRTPGVPLRWITAA 541

Query: 543 DIVAQQILLRHPDFVVARMKGQFWQVREKMFDYEGRYRRANELRG 587
           DIVAQQ LLRHPDFVVARMKGQ+WQVREK+FDYEGR+RRA+ELRG
Sbjct: 542 DIVAQQALLRHPDFVVARMKGQYWQVREKVFDYEGRFRRAHELRG 586