Pairwise Alignments

Query, 577 a.a., ATP-dependent endonuclease from Rahnella sp. WP5

Subject, 552 a.a., Predicted ATP-dependent endonuclease of the OLD family, YbjD subgroup from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  698 bits (1802), Expect = 0.0
 Identities = 364/577 (63%), Positives = 435/577 (75%), Gaps = 25/577 (4%)

Query: 1   MYLERVDIVGFRGINRLSLTLTQPAQRGASITGSAHQGQAESFLTNTVLIGENAWGKSSL 60
           M LERV+IVGFRGINRLSL L Q                      N VLIGENAWGKSSL
Sbjct: 1   MILERVEIVGFRGINRLSLMLEQ----------------------NNVLIGENAWGKSSL 38

Query: 61  LDALTLLLSPESKLYCFKEEDFYFPAGEEEAKSQYLHVVFTFCENQAGHHMSPRFNPLSP 120
           LDALTLLLSPE  LY F  EDF+FP G+ + +  +LH++ TF E Q G H   R+  L  
Sbjct: 39  LDALTLLLSPELDLYHFVREDFWFPPGDIKGREHHLHIILTFRETQPGRHRVRRYRALEA 98

Query: 121 LWVKCADKLNRIYYRLEGELDDDGSVMTLRSFLSSNGQPLNLTTIDPLAQALIRLNPVLR 180
            W  C D  +RI+YRLEGE   DGSVMTLRSFL+S+GQPL +  I+   + L+RL PVLR
Sbjct: 99  CWSLCEDDFHRIFYRLEGECGADGSVMTLRSFLNSDGQPLLVENINDQVRHLVRLMPVLR 158

Query: 181 LRDARFIRRLRSETLAPRLAVNNEELAKQLDELTRELVHSPQTLKNSELRSGLSAMRQLL 240
           LRDARF+RR+R+ T+ P +  + E  A+QLD L REL   PQ L + ++R GLSAM QLL
Sbjct: 159 LRDARFMRRIRNGTV-PNVP-DVEVTARQLDFLARELATRPQNLTDGQIRQGLSAMVQLL 216

Query: 241 EHYFAEQGTSSSAPWQQKRHGRAESRRAWRSLDNINRMIAEPNSRSMRVMLLGMFSTLLQ 300
           EHYF+EQG   +     +R  + E +R+WR LD INRMI +P SRS RV+LLG+FSTLLQ
Sbjct: 217 EHYFSEQGAGQARHRLMRRRSQNE-QRSWRYLDIINRMIDKPGSRSHRVILLGLFSTLLQ 275

Query: 301 AKGSVVLHPDARPLLLIEDPETRLHPIMLSVAWGLLDQLPLQRITTTNSGDLLSLVPVEQ 360
           AKG++ LH DARPLLL+EDPETRLHPIMLSVAW LL+ LPLQRI TTNSG+LLSL PVE 
Sbjct: 276 AKGTLRLHKDARPLLLVEDPETRLHPIMLSVAWQLLNLLPLQRIATTNSGELLSLTPVEH 335

Query: 361 ICRLVRESGRVAAYAIGPEGLSMEDSRRIAFHIRFNRPSSLFARCWLLVEGETEVWLLNQ 420
           + RLVRES RVAA+ +GP GLS ED RRIAFHIRFNR SSLFARCWLLVEGETE W++N+
Sbjct: 336 VVRLVRESSRVAAWRLGPGGLSAEDGRRIAFHIRFNRASSLFARCWLLVEGETETWVINE 395

Query: 421 LARQCGYHFESEGIKVIEFAQCGLKPLLRFARQMGIEWHALVDGDEAGRKYAATVIANVE 480
           LARQCG+HF++EGIKVIEFAQ GLKPL++FAR+MGIEWH LVDGDEAG+KYAATV + + 
Sbjct: 396 LARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLN 455

Query: 481 NHNDTLRYRLTALPSQDIEHFLYREGFEDVYRKNAAIPDNVPMSPRRIIDKAIHRSSKPD 540
           N  +  R  LTALP+ D+EHF+YR+GF DV+ + A +P NVPM+ R+II KAIHRSSKPD
Sbjct: 456 NDREEEREHLTALPALDMEHFMYRQGFADVFHRVAQLPPNVPMNTRKIITKAIHRSSKPD 515

Query: 541 LAIDVALAASLRGTSSIPALLRQMFSRVAWLARGRAD 577
           LAI+VA+ A  RG  ++P L R+MFSRV WLARGRAD
Sbjct: 516 LAIEVAMEAGRRGIDAVPPLFRKMFSRVVWLARGRAD 552