Pairwise Alignments

Query, 817 a.a., phage tail tape measure protein from Rahnella sp. WP5

Subject, 651 a.a., putative Phage tail protein from Pseudomonas putida KT2440

 Score = 83.2 bits (204), Expect = 4e-20
 Identities = 104/482 (21%), Positives = 198/482 (41%), Gaps = 59/482 (12%)

Query: 196 GVAAAGTVAGGAALKPGYDFSLKNSELQAVLGLEKDSADMLSLRKQARQLGDNTAASADD 255
           G  AA  +AG  A     DF  + ++++ V+    D+ D      Q +++GD+    ++ 
Sbjct: 52  GAMAAPFIAGARA---AIDFESQMADVRKVVNF--DTPD------QFKKMGDDIGRMSER 100

Query: 256 AAAAQIIVAK-------SGADKDGILAATPTILNLSLANKQSMEDNASLLMGVKSAFGLA 308
              A   +AK       SG  +D +L      + + +A  Q+ +++  ++   ++AF + 
Sbjct: 101 LPMAATDIAKIVAAGGQSGIARDELLGFAEAAVKMGIAFDQTADESGDMMTTWRTAFRMN 160

Query: 309 NDKVAHIGDVLSTTMNKSAADFAGMSDALTYAAPVAKNAGVSVEQTAAMVGALADAKITG 368
             +V  + D ++   N   A+   +S  +T    + + AG+S  Q AA+   +A   +  
Sbjct: 161 QAEVVSLADRINYLGNTGPANTKKISAIVTEVGALGEVAGMSSAQVAAIGATMAGVGVKQ 220

Query: 369 SMAGTGSRALITRLQAPTGAAATALDELGVKTADRKGDFRPIFTILKEMQKSFKKNNL-- 426
            +A TG +  +  +   T A     D       D K       T+ + MQK  +   L  
Sbjct: 221 DVAATGIKNFMLAMTKGTAATKAQADAYKALRLDAK-------TVAENMQKDAQGTTLDL 273

Query: 427 -------GTAQKAQYMKAIFGEEASSAAAVLMNDAS--SGKLDALTQALR---TSDGKTA 474
                    A++   +  +FG E+ +A   L+ +       LD +  A +   + + + A
Sbjct: 274 LKRISLIDAAKRPAILSELFGTESITAITPLLTNLELLRSNLDKVNDAKKFAGSMEQEYA 333

Query: 475 ELVEIMQNNLGGDFKEFQSAYEAVGTDIYDQQEASLRSLTQTATKYVLRLDKWIVDNKAL 534
                 +NN+       + + + V   I +     + ++ +    ++  + + I DN  L
Sbjct: 334 SRAATTRNNM----TLLRGSIDRVAVAIGNALLPGINAVLEQLRPWISHMAQMISDNPQL 389

Query: 535 ATTLAKIAGGAVMLVGALGVIGLIAGPVIG------GINMI---VAAAAGL----WSALS 581
              +  IAG A   + A      +A  V+G       I +I   +AAAAGL    W  + 
Sbjct: 390 VRGIV-IAGAAFTALRAAVFAATVATRVLGVAFAATPIGLIAAGIAAAAGLIVANWEKVG 448

Query: 582 IAGGAIATVIGGLTWPIVAIGVAIVAGA--LLIRKYWEPISAFFSGVIEGLGVAFEPVKE 639
               A+  +I   T P +    ++   A   LI K WEPI  +F G+ + +    EP+ +
Sbjct: 449 PFFSALWELIKAYTTPFMEFIKSVFGWAPLALIIKNWEPIVGWFKGLWDRVSPYLEPLLK 508

Query: 640 LF 641
           LF
Sbjct: 509 LF 510