Pairwise Alignments

Query, 713 a.a., TIGR01666 family membrane protein from Rahnella sp. WP5

Subject, 727 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  506 bits (1303), Expect = e-147
 Identities = 284/726 (39%), Positives = 415/726 (57%), Gaps = 30/726 (4%)

Query: 3   SIAPGLRRYAYNSNILYHIRIFIALTGAAALPWWLGQFTLTIPLTLGVVAAALADLDDRL 62
           S    LRR        Y IR+ IALTG+ AL W+  +  L IPL LG++A+ALA+ DD  
Sbjct: 5   SFRQSLRRLWGQDKFSYSIRVTIALTGSLALCWYQNEMALLIPLFLGIIASALAETDDSW 64

Query: 63  AGRLRNLLITLVCFFIASASIELLFPYPWLFAPGLMISTCGFILLGALGQRYATIAFGAL 122
            GRL  L +TLVCF IA+ ++ELLFPYPW+F   L ++  G  +LGALG+RY  IA   L
Sbjct: 65  QGRLSALAVTLVCFAIAALAVELLFPYPWIFVVALALAAFGLTMLGALGERYGAIASATL 124

Query: 123 LIAIYTMLGTS-----MYHIWYQQPLILLAGAIWYNLLTLAGHIIFPIRPLQDQISRCFT 177
           + A+YTM+G       +   W++ PL+L+AGA WY LL++    +F  +P+Q  ++R F 
Sbjct: 125 ITAVYTMIGVDQRGGQVTDFWHE-PLLLVAGAAWYGLLSVLWQALFSNQPVQQSLARLFF 183

Query: 178 QLAAYLEAKATLFDPDQD-DNNQQLVELAMANGQLVSTLNQTKNTLQTRLKGDRGQKGTR 236
           +L +YL+ KA+LF+P +  D   + +ELA  NG++V+ LN  K  +  R+   +      
Sbjct: 184 ELGSYLKLKASLFEPVRTLDVEARRLELAQQNGKVVAALNAAKEIILHRVGNSQPNSKVS 243

Query: 237 RTLHYYFVVQDIHERASSSHVQYLKLSEQFHHSDILFRFQRLMSMQARACLQLSQCILYR 296
           R L  YF+ QDIHER S+SH  Y  L+E F HSD++FR QRL+  Q  +C +L++ I  R
Sbjct: 244 RYLKLYFLAQDIHERVSASHYPYNALTEAFFHSDVMFRCQRLLRKQGSSCQELARSIRLR 303

Query: 297 QQYTHNSQFERAFSRLEEALK--RLESHHEHRETLQALRHLLRNLHAIDAQLANIESEQS 354
           Q +   S +  A   L  +L+  R++S+   R  L++LR L  NL  +D  L+   +  S
Sbjct: 304 QPFVLASGYPEALEDLNASLEHLRIQSNPAWRGLLRSLRALAANLATLDRLLSAASNPDS 363

Query: 355 LPENQTGKSPFAEDRLTGLDDIWLRISRHFTPQSVLFRHAIRMSVVLFVGYVFIQVSGLN 414
           L +     S   +     L D+W R+    TP S+LFRHA+R+ + L +GY  + +    
Sbjct: 364 LAD--ASDSSLLDRSPRSLKDVWTRLRTQLTPTSLLFRHALRLPLALSIGYGMVHLIHPT 421

Query: 415 HGYWILLTSLFVCQPNYSATRRRLALRIIGTLAGIALGIPILYFVPSVDGQMILIVISGL 474
            GYWI+LT+LFVCQPNY ATRR+L  RI GT  G+ +G  +    P+   Q +  V++G+
Sbjct: 422 QGYWIILTTLFVCQPNYGATRRKLVQRIFGTAVGLTVGWALFDLFPNPVIQSLFAVVAGV 481

Query: 475 LFFAFRTVQYAQATMFITLLVLLCFNLLGEGFEVAIPRVIDTLIGCGIAWAAVTFIWPDW 534
           +FF  RT +Y  AT  ITL+VL CFN +G+G+ + +PR+ DTL+G  IA  AV    PDW
Sbjct: 482 VFFVNRTTRYTLATAAITLMVLFCFNQIGDGYGLFLPRLFDTLVGSLIAILAVFLFLPDW 541

Query: 535 KFRQLDKVVRKTFDANCRYLDAILVQYHQGKDNSLEYRLARRDAHNCDAELASVVSNMSS 594
           + R+L+K +  T      YL  I+ QY  GK + L YRLARR+AHN DA L++ ++NM  
Sbjct: 542 QGRRLNKALANTLACASVYLRQIMQQYAHGKRDDLAYRLARRNAHNADAALSTTLANMLM 601

Query: 595 ERNNEPSTLEAAFRLLCLNHTMLSYISALGAHREKLNDAETLRLLDDAACCVDGALHHLP 654
           E  +     +  FR L L+HT+LSY+S LGAHR+    AE    L      ++GA   L 
Sbjct: 602 EPGHFRKEADVGFRFLVLSHTLLSYLSGLGAHRDTALPAEVQEQL------IEGAGQSLA 655

Query: 655 SEAERIQHALG-------------ELTARIQMRTTDIDSKEQLVLQQIGLLVAHLPELTS 701
           S  + I + L               L   ++    D+D  ++LV  Q+ L+   L  L +
Sbjct: 656 SSLDEIANGLAARLPVAIHSDSEEALANALEQMPEDLDEHQRLVQTQLALICRQLGPLRT 715

Query: 702 LNTKIL 707
           L   ++
Sbjct: 716 LAAHLI 721