Pairwise Alignments

Query, 713 a.a., TIGR01666 family membrane protein from Rahnella sp. WP5

Subject, 695 a.a., FIG00638035: hypothetical protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  129 bits (325), Expect = 4e-34
 Identities = 142/588 (24%), Positives = 250/588 (42%), Gaps = 53/588 (9%)

Query: 9   RRYAYNSNILYHIRIFIALTGAAALPWWLGQFTLTIPLTLGVVAAALADLDDRLAGRLRN 68
           RR  Y+  I Y +R  + L    A+   +GQ  L +  +L      +A LD       + 
Sbjct: 3   RRLIYHPEINYALRQTLVLCLPVAVGLLIGQLHLGLLFSLVPACCNIAGLDTPHKRFFKR 62

Query: 69  LLITLVCFFIASASIELLFPYPWLFAPGLMISTCGFILLGALGQ---RYATIAFGALLIA 125
           L+I    F   S   +LL        P  +I T   ++LG   +    +A +   +L+ A
Sbjct: 63  LIIGASLFAGCSLVTQLLLAES---IPLPLILTGLTLVLGVTAEISPLHARLLPASLIAA 119

Query: 126 IYTMLGTSMYHIWYQQPLILLA-GAIWYNLLTLAGHIIFPIRPLQDQISRCFTQLAAYLE 184
           I+T+       +W  +PL++ A G +WY +       ++  +PL++ +S  + +LA Y E
Sbjct: 120 IFTLSLAGYMPVW--EPLLIYALGTLWYGVFNWFWFWLWREQPLRESLSLLYRELADYCE 177

Query: 185 AKATLFDPDQDDNNQQLVELAMANGQLVSTLNQTKNTLQTRLKGDRGQKGTRRTLHYYFV 244
           AK +L      D  + L  L +   + V  + Q     Q  +         +R L  +  
Sbjct: 178 AKYSLLT-QHIDPEKALPPLLIRQQKAVDLITQCYQ--QMHMLSAHNNNDYKRLLRAFQE 234

Query: 245 VQDIHERASSSHVQ---YLKLSEQFHHSDILFRFQRLMSMQARACLQLSQCILYRQQYTH 301
             D+ E  S S  Q     KL E+ H  +++    + ++ + R    L+  ILY +  T 
Sbjct: 235 AMDLQEHISVSLHQPEEVQKLVERSHAEEVIRWNAQTVAARLRV---LADDILYHRLPTR 291

Query: 302 NSQFERAFSRLEEALKRLESHHEHRETLQ-------ALRHLLRNLHAIDAQLANIESEQS 354
            S  ++       AL+++ + H      Q        +  +LR    + A+    + ++ 
Sbjct: 292 FSMEKQI-----GALEKIANQHPENPVGQFCYWHFSRIARVLRTQRPLYARDLMADKQRR 346

Query: 355 LPENQTGKSPFAEDRLTGLDDIWLRISRHFTPQSVLFRHAIRMSVVLFVGYVFIQVSGLN 414
           LP                   +   +  + + +S   R+A R+SV++ +  +      L 
Sbjct: 347 LP-------------------LLPALKNYMSLKSPALRNAGRISVMMSIASLMGSALHLP 387

Query: 415 HGYWILLTSLFVCQPNYSATRRRLALRIIGTLAGIAL-GIPILYFVPSVDGQMILIVISG 473
             YWIL+T LFV Q  Y ATR R+  R +GTL G+ + G+ +   +P      +++V++ 
Sbjct: 388 KPYWILMTVLFVTQNGYGATRVRILHRSVGTLVGLVIAGVTLHLHIPESITLAVMLVLTL 447

Query: 474 LLFFAFRTVQYAQATMFITLLVLLCFNLLG-EGFEVAIPRVIDTLIGCGIAWAAVTFIWP 532
             +   R   Y  AT+  T+  +    LL   G +  +PR+IDTLIGC IA+  + ++WP
Sbjct: 448 ASYLIIRK-NYGWATVGFTVTAVYTIQLLTLNGEQFIVPRLIDTLIGCLIAFGGMVWLWP 506

Query: 533 DWKFRQLDKVVRKTFDANCRYLDAILVQYHQGKDNSLEYRLARRDAHN 580
            W+   L K      +A    +  IL    Q    + + R+    AHN
Sbjct: 507 QWQSGLLRKNAHDALEAAQEAIRLILSNDPQATPLAYQ-RMRVNQAHN 553