Pairwise Alignments

Query, 713 a.a., TIGR01666 family membrane protein from Rahnella sp. WP5

Subject, 717 a.a., Putative efflux (PET) family inner membrane protein YccS from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  993 bits (2568), Expect = 0.0
 Identities = 491/708 (69%), Positives = 585/708 (82%), Gaps = 4/708 (0%)

Query: 4   IAPGLRRYAYNSNILYHIRIFIALTGAAALPWWLGQFTLTIPLTLGVVAAALADLDDRLA 63
           ++P +RRY +NS  LY+IRIFIAL G  ALPWWLG   LTIPLTLG+VAAAL DLDDRLA
Sbjct: 2   LSPLIRRYTWNSTWLYYIRIFIALCGTTALPWWLGDVKLTIPLTLGMVAAALTDLDDRLA 61

Query: 64  GRLRNLLITLVCFFIASASIELLFPYPWLFAPGLMISTCGFILLGALGQRYATIAFGALL 123
           GRLRNL+ITL+CFFIASAS+ELLFP+PWLFA GL +ST GFILLG LGQRYATIAFGALL
Sbjct: 62  GRLRNLIITLICFFIASASVELLFPWPWLFALGLTLSTSGFILLGGLGQRYATIAFGALL 121

Query: 124 IAIYTMLGTSMYHIWYQQPLILLAGAIWYNLLTLAGHIIFPIRPLQDQISRCFTQLAAYL 183
           IAIYTMLGTS+Y  WYQQPL+LLAGA+WYNLLTL GH++FPIRPLQD ++R + QLA YL
Sbjct: 122 IAIYTMLGTSLYDHWYQQPLLLLAGAVWYNLLTLTGHLLFPIRPLQDNLARSYEQLAHYL 181

Query: 184 EAKATLFDPDQDDNNQQ-LVELAMANGQLVSTLNQTKNTLQTRLKGDRGQKGTRRTLHYY 242
           E K+ LFDPD +D +Q  L +LA+ANGQL++TLNQTK +L TRL+GDRGQ+GTRRTLHYY
Sbjct: 182 ELKSRLFDPDIEDESQAPLYDLALANGQLMATLNQTKVSLLTRLRGDRGQRGTRRTLHYY 241

Query: 243 FVVQDIHERASSSHVQYLKLSEQFHHSDILFRFQRLMSMQARACLQLSQCILYRQQYTHN 302
           FV QDIHERASSSH+QY  L + F HSD++FRFQRLMSMQA+AC QL++CIL R  Y H+
Sbjct: 242 FVAQDIHERASSSHIQYQTLRDYFRHSDVMFRFQRLMSMQAQACTQLARCILLRTPYQHD 301

Query: 303 SQFERAFSRLEEALKRLESHHEHRETLQALRHLLRNLHAIDAQLANIESEQS--LPENQT 360
            +FER F+ ++ AL+R+ +     E L  L  LL NL AIDAQLA IESEQ+  +P N++
Sbjct: 302 PRFERVFTHIDAALERMRASGASLELLNTLGFLLTNLRAIDAQLATIESEQAQAMPRNES 361

Query: 361 GKSPFAEDRLTGLDDIWLRISRHFTPQSVLFRHAIRMSVVLFVGYVFIQVSGLNHGYWIL 420
            ++  A+D L G  DIWLR+SR+FTP+S LFRHA+RMS+VL +GY  IQ++G+ HGYWIL
Sbjct: 362 -ENQLADDSLHGFSDIWLRLSRNFTPESALFRHAVRMSLVLCIGYALIQITGMRHGYWIL 420

Query: 421 LTSLFVCQPNYSATRRRLALRIIGTLAGIALGIPILYFVPSVDGQMILIVISGLLFFAFR 480
           LTSLFVCQPNY+ATR RLALRIIGTL G+A+G+PIL+FVPS++GQ++L+VI+G+LFFAFR
Sbjct: 421 LTSLFVCQPNYNATRHRLALRIIGTLVGVAIGLPILWFVPSLEGQLVLLVITGVLFFAFR 480

Query: 481 TVQYAQATMFITLLVLLCFNLLGEGFEVAIPRVIDTLIGCGIAWAAVTFIWPDWKFRQLD 540
            VQYA ATMFITLLVLLCFNLLGEGFEVA+PRV+DTLIGC IAWAAV+FIWPDW+FR L 
Sbjct: 481 NVQYAHATMFITLLVLLCFNLLGEGFEVALPRVVDTLIGCAIAWAAVSFIWPDWRFRNLP 540

Query: 541 KVVRKTFDANCRYLDAILVQYHQGKDNSLEYRLARRDAHNCDAELASVVSNMSSERNNEP 600
           +V+++  DANCRYLDAIL QYHQG+DN L YR+ARRDAHN DAELASVVSNMSSE +   
Sbjct: 541 RVLQRATDANCRYLDAILEQYHQGRDNRLAYRIARRDAHNRDAELASVVSNMSSEPDVTA 600

Query: 601 STLEAAFRLLCLNHTMLSYISALGAHREKLNDAETLRLLDDAACCVDGALHHLPSEAERI 660
            T EAAFRLLCLNHT  SYISALGAHREKL++ + L LLDDA C VD ALHH P + +R+
Sbjct: 601 ETREAAFRLLCLNHTFTSYISALGAHREKLSNPDVLGLLDDAVCYVDDALHHQPEDEQRV 660

Query: 661 QHALGELTARIQMRTTDIDSKEQLVLQQIGLLVAHLPELTSLNTKILP 708
             AL  L  R+Q   T  DSKE LV+QQIGLL+A LPE+  L  +I P
Sbjct: 661 HQALEGLKQRVQSLETRPDSKEPLVVQQIGLLIALLPEIGRLQRQISP 708