Pairwise Alignments

Query, 713 a.a., TIGR01666 family membrane protein from Rahnella sp. WP5

Subject, 700 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score =  135 bits (340), Expect = 7e-36
 Identities = 149/587 (25%), Positives = 248/587 (42%), Gaps = 45/587 (7%)

Query: 6   PGLRRYAYNSNILYHIRIFIALTGAAALPWWLGQFTLTIPLTLGVVAAALADLDDRLAGR 65
           P  RR  Y+ +I Y +R  + L    A+   LG+    +  +L      +A LD      
Sbjct: 4   PMWRRLIYHPDINYALRQTLVLCLPVAVGLMLGELRFGLLFSLVPACCNIAGLDTPHKRF 63

Query: 66  LRNLLITLVCFFIASASIELLF----PYPWLFAPGLMISTCGFILLGALGQRYATIAFGA 121
            + L+I    F   S   +LL     P P+L   GL   T    +   LG  +A +   +
Sbjct: 64  FKRLIIGASLFATCSLLTQLLLAKDVPLPFLLT-GL---TLVLGVTAELGPLHAKLLPAS 119

Query: 122 LLIAIYTMLGTSMYHIWYQQPLILLA-GAIWYNLLTLAGHIIFPIRPLQDQISRCFTQLA 180
           LL AI+T+       +W  +PL++ A G +WY L       I+  +PL++ +S  + +LA
Sbjct: 120 LLAAIFTLSLAGYMPVW--EPLLIYALGTLWYGLFNWFWFWIWREQPLRESLSLLYRELA 177

Query: 181 AYLEAKATLFDPDQDDNNQQLVELAMANGQLVSTLNQTKNTLQTRLKGDRGQKGTRRTLH 240
            Y EAK +L      D  + L  L +   + V  + Q     Q  +   +     +R L 
Sbjct: 178 DYCEAKYSLLT-QHTDPEKALPPLLVRQQKAVDLITQCYQ--QMHMLSAQNNTDYKRMLR 234

Query: 241 YYFVVQDIHERASSSHVQ---YLKLSEQFHHSDILFRFQRLMSMQARACLQLSQCILYRQ 297
            +    D+ E  S S  Q     KL E+ H  +++    + ++ + R    L+  ILY +
Sbjct: 235 IFQEALDLQEHISVSLHQPEEVQKLVERSHAEEVIRWNAQTVAARLRV---LADDILYHR 291

Query: 298 QYTHNSQFERAFSRLEEALKRLESHHEHRETLQALRHLLRNLHAIDAQLANIESEQSLPE 357
             T  +  E+    LE+  ++   H ++        H  R    +               
Sbjct: 292 LPTRFTM-EKQIGALEKIARQ---HPDNPVGQFCYWHFSRIARVL--------------- 332

Query: 358 NQTGKSPFAEDRLTGLD---DIWLRISRHFTPQSVLFRHAIRMSVVLFVGYVFIQVSGLN 414
            +T K  +A D L        +   +  + + +S   R+A R+SV+L V  +      L 
Sbjct: 333 -RTQKPLYARDLLADKQRRMPLLPALKSYLSLKSPALRNAGRLSVMLSVASLMGTALHLP 391

Query: 415 HGYWILLTSLFVCQPNYSATRRRLALRIIGTLAGIALGIPILYFVPSVDGQMILIVISGL 474
             YWIL+T L V Q  Y ATR R+  R +GT+ G+ +    L+F       + L++I+ L
Sbjct: 392 KSYWILMTVLLVTQNGYGATRLRIVNRSVGTVVGLIIAGVALHFKIPEGYTLTLMLITTL 451

Query: 475 LFFAFRTVQYAQATMFITLLVLLCFNLLG-EGFEVAIPRVIDTLIGCGIAWAAVTFIWPD 533
             +      Y  AT+  T+  +    LL   G +  +PR+IDT+IGC IA+    ++WP 
Sbjct: 452 ASYLILRKNYGWATVGFTITAVYTLQLLWLNGEQYILPRLIDTIIGCLIAFGGTVWLWPQ 511

Query: 534 WKFRQLDKVVRKTFDANCRYLDAILVQYHQGKDNSLEYRLARRDAHN 580
           W+   L K      +A    +  IL +  Q    + + R+    AHN
Sbjct: 512 WQSGLLRKNAHDALEAYQEAIRLILSEDPQPTPLAWQ-RMRVNQAHN 557